Experiment: Nalidixic 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21475 and ABZR86_RS21480 are separated by 417 nucleotides ABZR86_RS21480 and ABZR86_RS21485 overlap by 14 nucleotides
ABZR86_RS21475: ABZR86_RS21475 - hypothetical protein, at 262,494 to 262,847
_RS21475
ABZR86_RS21480: ABZR86_RS21480 - arginase family protein, at 263,265 to 264,140
_RS21480
ABZR86_RS21485: ABZR86_RS21485 - GNAT family N-acetyltransferase, at 264,127 to 265,194
_RS21485
Position (kb) 263
264
265 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 262.444 kb on + strand at 262.444 kb on + strand at 262.444 kb on + strand at 262.445 kb on - strand at 262.480 kb on - strand at 262.945 kb on + strand at 263.074 kb on - strand at 263.074 kb on - strand at 263.161 kb on + strand at 263.513 kb on + strand, within ABZR86_RS21480 at 263.526 kb on - strand, within ABZR86_RS21480 at 263.560 kb on + strand, within ABZR86_RS21480 at 263.560 kb on + strand, within ABZR86_RS21480 at 263.560 kb on + strand, within ABZR86_RS21480 at 263.561 kb on - strand, within ABZR86_RS21480 at 263.561 kb on - strand, within ABZR86_RS21480 at 263.693 kb on - strand, within ABZR86_RS21480 at 263.693 kb on - strand, within ABZR86_RS21480 at 263.725 kb on + strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.878 kb on - strand, within ABZR86_RS21480 at 264.266 kb on + strand, within ABZR86_RS21485 at 264.267 kb on - strand, within ABZR86_RS21485 at 264.267 kb on - strand, within ABZR86_RS21485 at 264.302 kb on + strand, within ABZR86_RS21485 at 264.303 kb on - strand, within ABZR86_RS21485 at 264.303 kb on - strand, within ABZR86_RS21485 at 264.303 kb on - strand, within ABZR86_RS21485 at 264.359 kb on + strand, within ABZR86_RS21485 at 264.359 kb on + strand, within ABZR86_RS21485 at 264.359 kb on + strand, within ABZR86_RS21485 at 264.360 kb on - strand, within ABZR86_RS21485 at 264.360 kb on - strand, within ABZR86_RS21485 at 264.387 kb on - strand, within ABZR86_RS21485 at 264.401 kb on + strand, within ABZR86_RS21485 at 264.402 kb on - strand, within ABZR86_RS21485 at 264.402 kb on - strand, within ABZR86_RS21485 at 264.471 kb on - strand, within ABZR86_RS21485 at 264.563 kb on + strand, within ABZR86_RS21485 at 264.564 kb on - strand, within ABZR86_RS21485 at 264.564 kb on - strand, within ABZR86_RS21485 at 264.575 kb on + strand, within ABZR86_RS21485 at 264.576 kb on - strand, within ABZR86_RS21485 at 264.584 kb on + strand, within ABZR86_RS21485 at 264.584 kb on + strand, within ABZR86_RS21485 at 264.584 kb on + strand, within ABZR86_RS21485 at 264.585 kb on - strand, within ABZR86_RS21485 at 264.585 kb on - strand, within ABZR86_RS21485 at 264.585 kb on - strand, within ABZR86_RS21485 at 264.716 kb on + strand, within ABZR86_RS21485 at 264.716 kb on + strand, within ABZR86_RS21485 at 264.749 kb on + strand, within ABZR86_RS21485 at 264.749 kb on + strand, within ABZR86_RS21485 at 264.750 kb on - strand, within ABZR86_RS21485 at 264.750 kb on - strand, within ABZR86_RS21485 at 264.750 kb on - strand, within ABZR86_RS21485 at 264.750 kb on - strand, within ABZR86_RS21485 at 264.779 kb on + strand, within ABZR86_RS21485 at 264.779 kb on + strand, within ABZR86_RS21485 at 264.780 kb on - strand, within ABZR86_RS21485
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.08 mg/ml remove 262,444 + -0.2 262,444 + -0.1 262,444 + +1.8 262,445 - -0.4 262,480 - +0.1 262,945 + -0.9 263,074 - -0.1 263,074 - -0.2 263,161 + -0.4 263,513 + ABZR86_RS21480 0.28 -0.6 263,526 - ABZR86_RS21480 0.30 -0.1 263,560 + ABZR86_RS21480 0.34 -1.4 263,560 + ABZR86_RS21480 0.34 -1.6 263,560 + ABZR86_RS21480 0.34 +0.3 263,561 - ABZR86_RS21480 0.34 -1.9 263,561 - ABZR86_RS21480 0.34 -0.4 263,693 - ABZR86_RS21480 0.49 -1.0 263,693 - ABZR86_RS21480 0.49 -2.0 263,725 + ABZR86_RS21480 0.53 +0.9 263,726 - ABZR86_RS21480 0.53 +1.1 263,726 - ABZR86_RS21480 0.53 -2.4 263,726 - ABZR86_RS21480 0.53 -1.2 263,726 - ABZR86_RS21480 0.53 -1.4 263,726 - ABZR86_RS21480 0.53 -2.1 263,878 - ABZR86_RS21480 0.70 -2.1 264,266 + ABZR86_RS21485 0.13 -1.1 264,267 - ABZR86_RS21485 0.13 -1.7 264,267 - ABZR86_RS21485 0.13 -0.9 264,302 + ABZR86_RS21485 0.16 +0.5 264,303 - ABZR86_RS21485 0.16 -2.6 264,303 - ABZR86_RS21485 0.16 -2.8 264,303 - ABZR86_RS21485 0.16 -0.7 264,359 + ABZR86_RS21485 0.22 -1.4 264,359 + ABZR86_RS21485 0.22 -0.4 264,359 + ABZR86_RS21485 0.22 -3.1 264,360 - ABZR86_RS21485 0.22 -2.3 264,360 - ABZR86_RS21485 0.22 +0.4 264,387 - ABZR86_RS21485 0.24 -0.2 264,401 + ABZR86_RS21485 0.26 -1.2 264,402 - ABZR86_RS21485 0.26 -2.9 264,402 - ABZR86_RS21485 0.26 +0.9 264,471 - ABZR86_RS21485 0.32 -0.7 264,563 + ABZR86_RS21485 0.41 -1.1 264,564 - ABZR86_RS21485 0.41 -1.6 264,564 - ABZR86_RS21485 0.41 -0.2 264,575 + ABZR86_RS21485 0.42 -1.4 264,576 - ABZR86_RS21485 0.42 -1.2 264,584 + ABZR86_RS21485 0.43 -0.6 264,584 + ABZR86_RS21485 0.43 +0.7 264,584 + ABZR86_RS21485 0.43 -0.5 264,585 - ABZR86_RS21485 0.43 -1.5 264,585 - ABZR86_RS21485 0.43 -1.4 264,585 - ABZR86_RS21485 0.43 -0.7 264,716 + ABZR86_RS21485 0.55 -0.2 264,716 + ABZR86_RS21485 0.55 -0.2 264,749 + ABZR86_RS21485 0.58 -1.1 264,749 + ABZR86_RS21485 0.58 -0.1 264,750 - ABZR86_RS21485 0.58 -1.6 264,750 - ABZR86_RS21485 0.58 -2.2 264,750 - ABZR86_RS21485 0.58 -0.8 264,750 - ABZR86_RS21485 0.58 -1.7 264,779 + ABZR86_RS21485 0.61 +0.4 264,779 + ABZR86_RS21485 0.61 -0.8 264,780 - ABZR86_RS21485 0.61 -1.3
Or see this region's nucleotide sequence