Experiment: Nalidixic 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20095 and ABZR86_RS20100 are separated by 41 nucleotides ABZR86_RS20100 and ABZR86_RS20105 are separated by 8 nucleotides ABZR86_RS20105 and ABZR86_RS20110 are separated by 146 nucleotides
ABZR86_RS20095: ABZR86_RS20095 - flagellar basal-body rod protein FlgF, at 512,545 to 513,285
_RS20095
ABZR86_RS20100: ABZR86_RS20100 - flagellar basal-body rod protein FlgG, at 513,327 to 514,112
_RS20100
ABZR86_RS20105: ABZR86_RS20105 - flagellar basal body L-ring protein FlgH, at 514,121 to 514,807
_RS20105
ABZR86_RS20110: ABZR86_RS20110 - flagellar basal body P-ring protein FlgI, at 514,954 to 516,042
_RS20110
Position (kb) 514
515 Strain fitness (log2 ratio) -2
-1
0
1 at 513.208 kb on + strand, within ABZR86_RS20095 at 513.463 kb on - strand, within ABZR86_RS20100 at 513.463 kb on - strand, within ABZR86_RS20100 at 513.667 kb on - strand, within ABZR86_RS20100 at 513.669 kb on - strand, within ABZR86_RS20100 at 513.901 kb on - strand, within ABZR86_RS20100 at 514.045 kb on - strand at 514.724 kb on + strand, within ABZR86_RS20105 at 514.724 kb on + strand, within ABZR86_RS20105 at 514.835 kb on + strand at 514.836 kb on - strand at 514.836 kb on - strand at 514.924 kb on - strand at 514.939 kb on - strand at 515.514 kb on + strand, within ABZR86_RS20110
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.08 mg/ml remove 513,208 + ABZR86_RS20095 0.89 +0.3 513,463 - ABZR86_RS20100 0.17 +0.8 513,463 - ABZR86_RS20100 0.17 -0.5 513,667 - ABZR86_RS20100 0.43 +0.5 513,669 - ABZR86_RS20100 0.44 -2.3 513,901 - ABZR86_RS20100 0.73 +0.0 514,045 - -0.1 514,724 + ABZR86_RS20105 0.88 -1.2 514,724 + ABZR86_RS20105 0.88 -0.3 514,835 + -0.9 514,836 - +0.4 514,836 - -1.3 514,924 - +0.0 514,939 - -0.1 515,514 + ABZR86_RS20110 0.51 +0.5
Or see this region's nucleotide sequence