Experiment: Nalidixic 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19455 and ABZR86_RS19460 overlap by 1 nucleotides ABZR86_RS19460 and ABZR86_RS19465 overlap by 4 nucleotides ABZR86_RS19465 and ABZR86_RS19470 overlap by 11 nucleotides
ABZR86_RS19455: ABZR86_RS19455 - RDD family protein, at 363,774 to 364,277
_RS19455
ABZR86_RS19460: ABZR86_RS19460 - RDD family protein, at 364,277 to 364,957
_RS19460
ABZR86_RS19465: ABZR86_RS19465 - stage II sporulation protein M, at 364,954 to 365,937
_RS19465
ABZR86_RS19470: ABZR86_RS19470 - hypothetical protein, at 365,927 to 367,465
_RS19470
Position (kb) 364
365 Strain fitness (log2 ratio) -2
-1
0
1 at 363.641 kb on + strand at 363.641 kb on + strand at 363.642 kb on - strand at 363.717 kb on - strand at 363.717 kb on - strand at 363.717 kb on - strand at 363.718 kb on + strand at 363.718 kb on + strand at 363.718 kb on + strand at 363.718 kb on + strand at 363.718 kb on + strand at 363.792 kb on + strand at 363.792 kb on + strand at 363.793 kb on - strand at 363.793 kb on - strand at 363.793 kb on - strand at 363.795 kb on + strand at 363.796 kb on - strand at 363.902 kb on + strand, within ABZR86_RS19455 at 364.173 kb on + strand, within ABZR86_RS19455 at 364.174 kb on - strand, within ABZR86_RS19455 at 364.174 kb on - strand, within ABZR86_RS19455 at 364.673 kb on + strand, within ABZR86_RS19460 at 365.188 kb on + strand, within ABZR86_RS19465 at 365.188 kb on + strand, within ABZR86_RS19465 at 365.398 kb on + strand, within ABZR86_RS19465 at 365.398 kb on + strand, within ABZR86_RS19465 at 365.398 kb on + strand, within ABZR86_RS19465 at 365.398 kb on + strand, within ABZR86_RS19465 at 365.398 kb on + strand, within ABZR86_RS19465 at 365.398 kb on + strand, within ABZR86_RS19465 at 365.399 kb on - strand, within ABZR86_RS19465 at 365.399 kb on - strand, within ABZR86_RS19465 at 365.399 kb on - strand, within ABZR86_RS19465 at 365.399 kb on - strand, within ABZR86_RS19465 at 365.461 kb on + strand, within ABZR86_RS19465 at 365.461 kb on + strand, within ABZR86_RS19465 at 365.533 kb on + strand, within ABZR86_RS19465 at 365.534 kb on - strand, within ABZR86_RS19465 at 365.534 kb on - strand, within ABZR86_RS19465
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.08 mg/ml remove 363,641 + -0.1 363,641 + -0.2 363,642 - -0.3 363,717 - +0.2 363,717 - -1.1 363,717 - +1.5 363,718 + -0.2 363,718 + -0.0 363,718 + -0.3 363,718 + -1.8 363,718 + +0.3 363,792 + -0.8 363,792 + -0.2 363,793 - +0.7 363,793 - -0.1 363,793 - -0.6 363,795 + -0.2 363,796 - +0.6 363,902 + ABZR86_RS19455 0.25 +0.1 364,173 + ABZR86_RS19455 0.79 -0.5 364,174 - ABZR86_RS19455 0.79 -0.2 364,174 - ABZR86_RS19455 0.79 -0.5 364,673 + ABZR86_RS19460 0.58 -1.1 365,188 + ABZR86_RS19465 0.24 -0.4 365,188 + ABZR86_RS19465 0.24 +1.0 365,398 + ABZR86_RS19465 0.45 -0.5 365,398 + ABZR86_RS19465 0.45 -1.8 365,398 + ABZR86_RS19465 0.45 -0.1 365,398 + ABZR86_RS19465 0.45 -0.9 365,398 + ABZR86_RS19465 0.45 -0.5 365,398 + ABZR86_RS19465 0.45 -0.6 365,399 - ABZR86_RS19465 0.45 -0.4 365,399 - ABZR86_RS19465 0.45 -1.1 365,399 - ABZR86_RS19465 0.45 +0.5 365,399 - ABZR86_RS19465 0.45 -0.2 365,461 + ABZR86_RS19465 0.52 -0.3 365,461 + ABZR86_RS19465 0.52 -0.1 365,533 + ABZR86_RS19465 0.59 +0.5 365,534 - ABZR86_RS19465 0.59 +0.1 365,534 - ABZR86_RS19465 0.59 +0.1
Or see this region's nucleotide sequence