Experiment: Nalidixic 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19095 and ABZR86_RS19100 are separated by 211 nucleotides ABZR86_RS19100 and ABZR86_RS19105 are separated by 109 nucleotides ABZR86_RS19105 and ABZR86_RS19110 are separated by 101 nucleotides
ABZR86_RS19095: ABZR86_RS19095 - hybrid sensor histidine kinase/response regulator, at 260,069 to 263,668
_RS19095
ABZR86_RS19100: ABZR86_RS19100 - DNA polymerase III subunit chi, at 263,880 to 264,302
_RS19100
ABZR86_RS19105: ABZR86_RS19105 - leucyl aminopeptidase, at 264,412 to 265,911
_RS19105
ABZR86_RS19110: ABZR86_RS19110 - LPS export ABC transporter permease LptF, at 266,013 to 267,122
_RS19110
Position (kb) 264
265
266 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 263.582 kb on - strand at 263.582 kb on - strand at 263.881 kb on + strand at 263.881 kb on + strand at 263.881 kb on + strand at 263.881 kb on + strand at 263.881 kb on + strand at 263.881 kb on + strand at 263.882 kb on - strand at 263.882 kb on - strand at 263.882 kb on - strand at 263.885 kb on + strand at 263.885 kb on + strand at 263.885 kb on + strand at 263.886 kb on - strand at 263.886 kb on - strand at 263.886 kb on - strand at 264.385 kb on - strand at 264.391 kb on + strand at 264.391 kb on + strand at 264.637 kb on + strand, within ABZR86_RS19105 at 264.637 kb on + strand, within ABZR86_RS19105 at 264.638 kb on - strand, within ABZR86_RS19105 at 264.645 kb on - strand, within ABZR86_RS19105 at 264.830 kb on + strand, within ABZR86_RS19105 at 265.050 kb on - strand, within ABZR86_RS19105 at 265.050 kb on - strand, within ABZR86_RS19105 at 265.160 kb on + strand, within ABZR86_RS19105 at 265.160 kb on + strand, within ABZR86_RS19105 at 265.161 kb on - strand, within ABZR86_RS19105 at 265.161 kb on - strand, within ABZR86_RS19105 at 265.161 kb on - strand, within ABZR86_RS19105 at 265.314 kb on - strand, within ABZR86_RS19105 at 265.314 kb on - strand, within ABZR86_RS19105 at 265.314 kb on - strand, within ABZR86_RS19105 at 265.314 kb on - strand, within ABZR86_RS19105 at 265.488 kb on - strand, within ABZR86_RS19105 at 265.488 kb on - strand, within ABZR86_RS19105 at 265.915 kb on + strand at 265.955 kb on - strand at 265.955 kb on - strand at 265.955 kb on - strand at 265.955 kb on - strand at 266.007 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.08 mg/ml remove 263,582 - -0.9 263,582 - +0.2 263,881 + -0.7 263,881 + -0.7 263,881 + -0.7 263,881 + -0.4 263,881 + +0.1 263,881 + +0.4 263,882 - +0.5 263,882 - +0.3 263,882 - -1.7 263,885 + -1.2 263,885 + -0.8 263,885 + -0.4 263,886 - -0.0 263,886 - +0.1 263,886 - -0.8 264,385 - +0.7 264,391 + -0.5 264,391 + +0.4 264,637 + ABZR86_RS19105 0.15 +0.2 264,637 + ABZR86_RS19105 0.15 -2.6 264,638 - ABZR86_RS19105 0.15 -0.5 264,645 - ABZR86_RS19105 0.16 -0.9 264,830 + ABZR86_RS19105 0.28 -0.2 265,050 - ABZR86_RS19105 0.43 -0.3 265,050 - ABZR86_RS19105 0.43 -0.8 265,160 + ABZR86_RS19105 0.50 -1.5 265,160 + ABZR86_RS19105 0.50 -1.0 265,161 - ABZR86_RS19105 0.50 -2.3 265,161 - ABZR86_RS19105 0.50 +0.1 265,161 - ABZR86_RS19105 0.50 -2.9 265,314 - ABZR86_RS19105 0.60 -1.2 265,314 - ABZR86_RS19105 0.60 -0.8 265,314 - ABZR86_RS19105 0.60 -1.7 265,314 - ABZR86_RS19105 0.60 -0.1 265,488 - ABZR86_RS19105 0.72 -0.8 265,488 - ABZR86_RS19105 0.72 -1.2 265,915 + -0.2 265,955 - -0.7 265,955 - -0.2 265,955 - -1.2 265,955 - -0.1 266,007 + -0.8
Or see this region's nucleotide sequence