Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17485

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,948,270	+		ABZR86_RS17480	0.26	+0.5
3,948,305	-		ABZR86_RS17480	0.29	-0.9
3,948,305	-		ABZR86_RS17480	0.29	+0.1
3,948,305	-		ABZR86_RS17480	0.29	-0.9
3,948,347	-		ABZR86_RS17480	0.33	-1.2
3,948,347	-		ABZR86_RS17480	0.33	-0.7
3,948,347	-		ABZR86_RS17480	0.33	-0.4
3,948,364	+		ABZR86_RS17480	0.35	-0.3
3,948,364	+		ABZR86_RS17480	0.35	+0.1
3,948,365	-		ABZR86_RS17480	0.35	-1.4
3,948,365	-		ABZR86_RS17480	0.35	-0.1
3,948,365	-		ABZR86_RS17480	0.35	-1.1
3,948,365	-		ABZR86_RS17480	0.35	-0.5
3,948,365	-		ABZR86_RS17480	0.35	-0.9
3,948,397	+		ABZR86_RS17480	0.38	+0.2
3,948,397	+		ABZR86_RS17480	0.38	+0.8
3,948,397	+		ABZR86_RS17480	0.38	+0.8
3,948,397	+		ABZR86_RS17480	0.38	-0.4
3,948,418	+		ABZR86_RS17480	0.40	-1.6
3,948,418	+		ABZR86_RS17480	0.40	-0.3
3,948,418	+		ABZR86_RS17480	0.40	+0.2
3,948,419	-		ABZR86_RS17480	0.40	-1.2
3,948,419	-		ABZR86_RS17480	0.40	-1.9
3,948,419	-		ABZR86_RS17480	0.40	-1.4
3,948,419	-		ABZR86_RS17480	0.40	-1.1
3,948,419	-		ABZR86_RS17480	0.40	-0.7
3,948,454	+		ABZR86_RS17480	0.44	-0.4
3,948,454	+		ABZR86_RS17480	0.44	-0.9
3,948,457	+		ABZR86_RS17480	0.44	+0.1
3,948,458	-		ABZR86_RS17480	0.44	-2.3
3,948,458	-		ABZR86_RS17480	0.44	-0.4
3,948,458	-		ABZR86_RS17480	0.44	+0.8
3,948,686	-		ABZR86_RS17480	0.67	-0.1
3,948,686	-		ABZR86_RS17480	0.67	-0.6
3,948,686	-		ABZR86_RS17480	0.67	+0.0
3,948,686	-		ABZR86_RS17480	0.67	-1.4
3,948,818	-		ABZR86_RS17480	0.80	+0.0
3,948,893	-		ABZR86_RS17480	0.87	+0.3
3,948,916	+		ABZR86_RS17480	0.90	-0.4
3,948,917	-		ABZR86_RS17480	0.90	-0.2
3,948,917	-		ABZR86_RS17480	0.90	+0.7
3,948,931	+				-0.8
3,948,931	+				-0.9
3,948,931	+				-2.0
3,948,931	+				-0.2
3,948,931	+				-0.5
3,948,931	+				-0.1
3,948,932	-				-0.5
3,948,932	-				-0.1
3,948,932	-				-0.5
3,948,950	-				-0.1
3,949,114	-		ABZR86_RS17485	0.10	-1.5
3,949,114	-		ABZR86_RS17485	0.10	-1.8
3,949,115	+		ABZR86_RS17485	0.10	+0.8
3,949,115	+		ABZR86_RS17485	0.10	+0.1
3,949,116	-		ABZR86_RS17485	0.10	-0.2
3,949,116	-		ABZR86_RS17485	0.10	-1.7
3,949,146	+		ABZR86_RS17485	0.13	-1.0
3,949,146	+		ABZR86_RS17485	0.13	-1.6
3,949,147	-		ABZR86_RS17485	0.13	-0.9
3,949,311	+		ABZR86_RS17485	0.30	-0.0
3,949,312	-		ABZR86_RS17485	0.31	-1.9
3,949,312	-		ABZR86_RS17485	0.31	-1.2
3,949,329	+		ABZR86_RS17485	0.32	-0.5
3,949,329	+		ABZR86_RS17485	0.32	-0.4
3,949,329	+		ABZR86_RS17485	0.32	-2.3
3,949,329	+		ABZR86_RS17485	0.32	-0.6
3,949,330	-		ABZR86_RS17485	0.32	-0.1
3,949,330	-		ABZR86_RS17485	0.32	-2.8
3,949,350	+		ABZR86_RS17485	0.34	-0.4
3,949,350	+		ABZR86_RS17485	0.34	+0.2
3,949,350	+		ABZR86_RS17485	0.34	-0.8
3,949,350	+		ABZR86_RS17485	0.34	-3.0
3,949,350	+		ABZR86_RS17485	0.34	-1.1
3,949,351	-		ABZR86_RS17485	0.35	-2.2
3,949,351	-		ABZR86_RS17485	0.35	-1.3
3,949,351	-		ABZR86_RS17485	0.35	-3.3
3,949,351	-		ABZR86_RS17485	0.35	-0.9
3,949,377	+		ABZR86_RS17485	0.37	-0.4
3,949,377	+		ABZR86_RS17485	0.37	-2.1
3,949,377	+		ABZR86_RS17485	0.37	-0.7
3,949,377	+		ABZR86_RS17485	0.37	-0.1
3,949,377	+		ABZR86_RS17485	0.37	+0.0
3,949,378	-		ABZR86_RS17485	0.37	-0.7
3,949,378	-		ABZR86_RS17485	0.37	-0.7
3,949,378	-		ABZR86_RS17485	0.37	-0.0
3,949,378	-		ABZR86_RS17485	0.37	-0.9
3,949,404	+		ABZR86_RS17485	0.40	+0.2
3,949,404	+		ABZR86_RS17485	0.40	-0.0
3,949,405	-		ABZR86_RS17485	0.40	-1.3
3,949,405	-		ABZR86_RS17485	0.40	-0.6
3,949,405	-		ABZR86_RS17485	0.40	-0.9
3,949,405	-		ABZR86_RS17485	0.40	-1.0
3,949,405	-		ABZR86_RS17485	0.40	-0.7
3,949,425	+		ABZR86_RS17485	0.42	-0.7
3,949,425	+		ABZR86_RS17485	0.42	-1.4
3,949,425	+		ABZR86_RS17485	0.42	-2.0
3,949,449	+		ABZR86_RS17485	0.45	-0.5
3,949,449	+		ABZR86_RS17485	0.45	-0.5
3,949,458	+		ABZR86_RS17485	0.46	-2.9
3,949,458	+		ABZR86_RS17485	0.46	-0.4
3,949,458	+		ABZR86_RS17485	0.46	-1.7
3,949,458	+		ABZR86_RS17485	0.46	-0.2
3,949,458	+		ABZR86_RS17485	0.46	-1.1
3,949,458	+		ABZR86_RS17485	0.46	-0.5
3,949,458	+		ABZR86_RS17485	0.46	+0.9
3,949,458	+		ABZR86_RS17485	0.46	-0.3
3,949,458	+		ABZR86_RS17485	0.46	-0.0
3,949,458	+		ABZR86_RS17485	0.46	-2.1
3,949,458	+		ABZR86_RS17485	0.46	-0.8
3,949,459	-		ABZR86_RS17485	0.46	-0.4
3,949,459	-		ABZR86_RS17485	0.46	-1.4
3,949,459	-		ABZR86_RS17485	0.46	-2.3
3,949,459	-		ABZR86_RS17485	0.46	+0.1
3,949,459	-		ABZR86_RS17485	0.46	-0.9
3,949,500	+		ABZR86_RS17485	0.50	-0.6
3,949,500	+		ABZR86_RS17485	0.50	-0.1
3,949,501	-		ABZR86_RS17485	0.50	-0.2
3,949,596	+		ABZR86_RS17485	0.60	-0.0
3,949,596	+		ABZR86_RS17485	0.60	-0.3
3,949,597	-		ABZR86_RS17485	0.60	-0.6
3,949,597	-		ABZR86_RS17485	0.60	-2.0
3,949,623	+		ABZR86_RS17485	0.63	+0.3
3,949,758	+		ABZR86_RS17485	0.77	+0.5
3,949,758	+		ABZR86_RS17485	0.77	-0.5
3,949,758	+		ABZR86_RS17485	0.77	-0.5
3,949,758	+		ABZR86_RS17485	0.77	-0.8
3,949,758	+		ABZR86_RS17485	0.77	-0.8
3,949,758	+		ABZR86_RS17485	0.77	-1.0
3,949,758	+		ABZR86_RS17485	0.77	-1.0
3,949,759	-		ABZR86_RS17485	0.77	-0.5
3,949,759	-		ABZR86_RS17485	0.77	+0.0
3,949,759	-		ABZR86_RS17485	0.77	-0.8
3,949,759	-		ABZR86_RS17485	0.77	+0.0
3,949,759	-		ABZR86_RS17485	0.77	+1.6
3,949,759	-		ABZR86_RS17485	0.77	+0.0
3,949,891	+				+0.2