Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17185

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,880,813	+		ABZR86_RS17180	0.40	+0.2
3,880,813	+		ABZR86_RS17180	0.40	-1.2
3,880,813	+		ABZR86_RS17180	0.40	-1.6
3,880,814	-		ABZR86_RS17180	0.40	+2.1
3,880,814	-		ABZR86_RS17180	0.40	-2.1
3,880,814	-		ABZR86_RS17180	0.40	-1.0
3,880,829	-		ABZR86_RS17180	0.41	-1.3
3,881,101	+		ABZR86_RS17180	0.65	-1.0
3,881,101	+		ABZR86_RS17180	0.65	-0.7
3,881,101	+		ABZR86_RS17180	0.65	-1.5
3,881,102	-		ABZR86_RS17180	0.66	-1.7
3,881,102	-		ABZR86_RS17180	0.66	-1.9
3,881,102	-		ABZR86_RS17180	0.66	-1.5
3,881,191	+		ABZR86_RS17180	0.73	-1.0
3,881,191	+		ABZR86_RS17180	0.73	-1.0
3,881,191	+		ABZR86_RS17180	0.73	-1.8
3,881,191	+		ABZR86_RS17180	0.73	-3.0
3,881,191	+		ABZR86_RS17180	0.73	+1.1
3,881,191	+		ABZR86_RS17180	0.73	-1.5
3,881,191	+		ABZR86_RS17180	0.73	-2.5
3,881,192	-		ABZR86_RS17180	0.73	-0.7
3,881,192	-		ABZR86_RS17180	0.73	-1.0
3,881,192	-		ABZR86_RS17180	0.73	-1.5
3,881,192	-		ABZR86_RS17180	0.73	-0.8
3,881,192	-		ABZR86_RS17180	0.73	-3.3
3,881,291	-		ABZR86_RS17180	0.82	-0.6
3,881,329	+		ABZR86_RS17180	0.86	-3.0
3,881,330	-		ABZR86_RS17180	0.86	-1.2
3,881,467	+				-0.5
3,881,468	-				-0.5
3,881,468	-				-3.1
3,881,548	+				-0.2
3,881,548	+				-0.4
3,881,548	+				+0.2
3,881,548	+				-0.3
3,881,549	-				-0.4
3,881,549	-				+0.3
3,881,549	-				-0.8
3,881,563	+				-0.7
3,881,563	+				-0.1
3,881,563	+				+0.2
3,881,564	-				-0.4
3,881,564	-				+2.3
3,881,649	+				+1.3
3,881,650	-				-0.1
3,881,650	-				-0.5
3,881,650	-				-0.3
3,881,650	-				+0.2
3,881,886	+		ABZR86_RS17185	0.16	-2.0
3,881,886	+		ABZR86_RS17185	0.16	-0.8
3,881,886	+		ABZR86_RS17185	0.16	-0.6
3,881,886	+		ABZR86_RS17185	0.16	-0.6
3,881,886	+		ABZR86_RS17185	0.16	-0.3
3,881,886	+		ABZR86_RS17185	0.16	+0.2
3,881,887	-		ABZR86_RS17185	0.16	-0.3
3,881,887	-		ABZR86_RS17185	0.16	-1.0
3,881,887	-		ABZR86_RS17185	0.16	-1.0
3,881,887	-		ABZR86_RS17185	0.16	-1.0
3,881,967	+		ABZR86_RS17185	0.23	+0.1
3,881,968	-		ABZR86_RS17185	0.23	-0.9
3,881,968	-		ABZR86_RS17185	0.23	+0.4
3,881,985	+		ABZR86_RS17185	0.24	-0.2
3,881,985	+		ABZR86_RS17185	0.24	-0.3
3,882,030	+		ABZR86_RS17185	0.27	-2.0
3,882,030	+		ABZR86_RS17185	0.27	-1.8
3,882,030	+		ABZR86_RS17185	0.27	-2.2
3,882,030	+		ABZR86_RS17185	0.27	-0.8
3,882,030	+		ABZR86_RS17185	0.27	-0.9
3,882,031	-		ABZR86_RS17185	0.28	-1.4
3,882,031	-		ABZR86_RS17185	0.28	-2.0
3,882,031	-		ABZR86_RS17185	0.28	-0.6
3,882,031	-		ABZR86_RS17185	0.28	-0.7
3,882,163	+		ABZR86_RS17185	0.38	-1.1
3,882,164	-		ABZR86_RS17185	0.38	-1.3
3,882,303	+		ABZR86_RS17185	0.49	-1.1
3,882,303	+		ABZR86_RS17185	0.49	-0.3
3,882,303	+		ABZR86_RS17185	0.49	-1.8
3,882,303	+		ABZR86_RS17185	0.49	-2.4
3,882,303	+		ABZR86_RS17185	0.49	-0.1
3,882,303	+		ABZR86_RS17185	0.49	-1.9
3,882,304	-		ABZR86_RS17185	0.49	-0.4
3,882,304	-		ABZR86_RS17185	0.49	-0.7
3,882,304	-		ABZR86_RS17185	0.49	+0.2
3,882,515	+		ABZR86_RS17185	0.66	-0.8
3,882,516	-		ABZR86_RS17185	0.66	-0.9
3,882,585	+		ABZR86_RS17185	0.71	-1.0
3,882,855	+				-1.3
3,882,856	-				-1.4
3,882,856	-				-2.5
3,882,856	-				-0.8
3,882,915	+				+0.6
3,882,915	+				+0.7
3,882,915	+				+0.2
3,882,915	+				-1.7
3,882,915	+				+1.0
3,882,916	-				+0.0
3,882,916	-				+0.1
3,882,916	-				+0.5
3,883,084	+		ABZR86_RS17190	0.19	-0.3
3,883,085	-		ABZR86_RS17190	0.19	+0.7
3,883,255	+		ABZR86_RS17190	0.40	-0.2
3,883,262	+		ABZR86_RS17190	0.41	+0.2
3,883,262	+		ABZR86_RS17190	0.41	+0.6
3,883,263	-		ABZR86_RS17190	0.41	-0.5
3,883,321	+		ABZR86_RS17190	0.48	+0.5
3,883,321	+		ABZR86_RS17190	0.48	+0.6
3,883,321	+		ABZR86_RS17190	0.48	-0.4
3,883,321	+		ABZR86_RS17190	0.48	-0.0
3,883,322	-		ABZR86_RS17190	0.49	+0.1
3,883,322	-		ABZR86_RS17190	0.49	+0.3
3,883,322	-		ABZR86_RS17190	0.49	-0.5
3,883,322	-		ABZR86_RS17190	0.49	+2.8
3,883,322	-		ABZR86_RS17190	0.49	+0.4
3,883,322	-		ABZR86_RS17190	0.49	+0.3
3,883,322	-		ABZR86_RS17190	0.49	-1.4
3,883,322	-		ABZR86_RS17190	0.49	-0.1
3,883,322	-		ABZR86_RS17190	0.49	+1.7
3,883,322	-		ABZR86_RS17190	0.49	-0.6
3,883,415	+		ABZR86_RS17190	0.60	+0.4
3,883,415	+		ABZR86_RS17190	0.60	-0.0
3,883,415	+		ABZR86_RS17190	0.60	+0.5
3,883,415	+		ABZR86_RS17190	0.60	-0.5
3,883,415	+		ABZR86_RS17190	0.60	+1.0
3,883,415	+		ABZR86_RS17190	0.60	-0.5
3,883,415	+		ABZR86_RS17190	0.60	+0.0
3,883,416	-		ABZR86_RS17190	0.60	-0.4
3,883,416	-		ABZR86_RS17190	0.60	+0.3
3,883,416	-		ABZR86_RS17190	0.60	-1.0
3,883,416	-		ABZR86_RS17190	0.60	-0.2
3,883,416	-		ABZR86_RS17190	0.60	-1.4
3,883,429	+		ABZR86_RS17190	0.62	+0.5
3,883,568	-		ABZR86_RS17190	0.80	+0.9
3,883,570	+		ABZR86_RS17190	0.80	+0.4
3,883,570	+		ABZR86_RS17190	0.80	-0.6
3,883,571	-		ABZR86_RS17190	0.80	+0.1
3,883,588	+		ABZR86_RS17190	0.82	+0.0
3,883,588	+		ABZR86_RS17190	0.82	+0.0
3,883,636	+		ABZR86_RS17190	0.88	-0.2
3,883,636	+		ABZR86_RS17190	0.88	+0.0
3,883,636	+		ABZR86_RS17190	0.88	-0.5
3,883,637	-		ABZR86_RS17190	0.88	+0.1
3,883,637	-		ABZR86_RS17190	0.88	-1.6
3,883,651	+				-0.3
3,883,652	-				-0.0
3,883,664	-				+0.5
3,883,726	+				+0.6
3,883,896	+		ABZR86_RS17195	0.17	+0.9
3,883,896	+		ABZR86_RS17195	0.17	-1.6
3,883,896	+		ABZR86_RS17195	0.17	+1.2
3,883,896	+		ABZR86_RS17195	0.17	-0.5
3,883,896	+		ABZR86_RS17195	0.17	+0.3
3,883,897	-		ABZR86_RS17195	0.17	-0.1
3,883,897	-		ABZR86_RS17195	0.17	+0.4
3,883,897	-		ABZR86_RS17195	0.17	-0.2
3,883,897	-		ABZR86_RS17195	0.17	-0.7
3,883,897	-		ABZR86_RS17195	0.17	+0.7
3,883,897	-		ABZR86_RS17195	0.17	-0.2
3,883,947	+		ABZR86_RS17195	0.23	-1.6