Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17015

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,844,891	-		ABZR86_RS17010	0.39	+0.6
3,844,981	+		ABZR86_RS17010	0.48	+0.1
3,844,981	+		ABZR86_RS17010	0.48	+0.1
3,844,981	+		ABZR86_RS17010	0.48	+0.7
3,845,115	+		ABZR86_RS17010	0.61	+0.2
3,845,115	+		ABZR86_RS17010	0.61	-0.7
3,845,116	-		ABZR86_RS17010	0.61	+0.6
3,845,116	-		ABZR86_RS17010	0.61	+0.2
3,845,374	-		ABZR86_RS17010	0.86	+0.3
3,845,374	-		ABZR86_RS17010	0.86	-0.2
3,845,374	-		ABZR86_RS17010	0.86	+0.1
3,845,593	+				+0.4
3,845,734	+				+1.1
3,845,734	+				-0.2
3,845,734	+				+1.0
3,845,734	+				+0.9
3,845,735	-				-0.9
3,845,748	+				+0.8
3,845,748	+				-2.0
3,845,748	+				+0.2
3,845,748	+				+0.9
3,845,748	+				+0.0
3,845,748	+				-0.2
3,845,749	-				+0.5
3,845,749	-				-0.7
3,845,749	-				-0.8
3,845,749	-				-0.3
3,845,749	-				-0.4
3,845,749	-				-1.2
3,845,749	-				-1.9
3,845,749	-				-1.6
3,845,749	-				-0.2
3,845,749	-				+0.9
3,845,749	-				-1.4
3,845,749	-				-0.8
3,845,749	-				-0.6
3,846,149	+		ABZR86_RS17015	0.11	-1.3
3,846,180	-		ABZR86_RS17015	0.13	-2.2
3,846,248	+		ABZR86_RS17015	0.15	-2.9
3,846,249	-		ABZR86_RS17015	0.15	-1.7
3,846,260	+		ABZR86_RS17015	0.16	-2.8
3,846,260	+		ABZR86_RS17015	0.16	+0.1
3,846,260	+		ABZR86_RS17015	0.16	-2.7
3,846,260	+		ABZR86_RS17015	0.16	-2.1
3,846,260	+		ABZR86_RS17015	0.16	-1.8
3,846,260	+		ABZR86_RS17015	0.16	-1.2
3,846,260	+		ABZR86_RS17015	0.16	-0.9
3,846,261	-		ABZR86_RS17015	0.16	-1.4
3,846,261	-		ABZR86_RS17015	0.16	-0.2
3,846,261	-		ABZR86_RS17015	0.16	-1.4
3,846,261	-		ABZR86_RS17015	0.16	-2.6
3,846,323	+		ABZR86_RS17015	0.18	-1.5
3,846,324	-		ABZR86_RS17015	0.18	-1.7
3,846,324	-		ABZR86_RS17015	0.18	-2.6
3,846,324	-		ABZR86_RS17015	0.18	-2.1
3,846,324	-		ABZR86_RS17015	0.18	-1.3
3,846,644	+		ABZR86_RS17015	0.30	+0.8
3,846,644	+		ABZR86_RS17015	0.30	-0.9
3,846,644	+		ABZR86_RS17015	0.30	-0.0
3,846,644	+		ABZR86_RS17015	0.30	-1.8
3,846,644	+		ABZR86_RS17015	0.30	-2.2
3,846,644	+		ABZR86_RS17015	0.30	-1.1
3,846,644	+		ABZR86_RS17015	0.30	-0.7
3,846,645	-		ABZR86_RS17015	0.30	-1.9
3,846,645	-		ABZR86_RS17015	0.30	-2.9
3,846,645	-		ABZR86_RS17015	0.30	-1.7
3,846,645	-		ABZR86_RS17015	0.30	-0.4
3,846,645	-		ABZR86_RS17015	0.30	-1.5
3,846,699	+		ABZR86_RS17015	0.32	+0.5
3,846,701	+		ABZR86_RS17015	0.32	-2.0
3,846,701	+		ABZR86_RS17015	0.32	+0.5
3,846,701	+		ABZR86_RS17015	0.32	-1.3
3,846,701	+		ABZR86_RS17015	0.32	-1.2
3,846,701	+		ABZR86_RS17015	0.32	-2.7
3,846,701	+		ABZR86_RS17015	0.32	-1.6
3,846,701	+		ABZR86_RS17015	0.32	+0.5
3,846,702	-		ABZR86_RS17015	0.32	-2.0
3,846,702	-		ABZR86_RS17015	0.32	-0.9
3,846,702	-		ABZR86_RS17015	0.32	-3.8
3,846,702	-		ABZR86_RS17015	0.32	-1.5
3,846,731	+		ABZR86_RS17015	0.33	-1.8
3,847,043	+		ABZR86_RS17015	0.44	-1.6
3,847,044	-		ABZR86_RS17015	0.44	-0.0
3,847,044	-		ABZR86_RS17015	0.44	-2.3
3,847,202	+		ABZR86_RS17015	0.50	-0.4
3,847,227	-		ABZR86_RS17015	0.51	-0.3
3,847,280	+		ABZR86_RS17015	0.53	-1.8
3,847,329	-		ABZR86_RS17015	0.55	-1.7
3,847,329	-		ABZR86_RS17015	0.55	-2.1
3,847,352	+		ABZR86_RS17015	0.56	-1.5
3,847,353	-		ABZR86_RS17015	0.56	-3.4
3,847,353	-		ABZR86_RS17015	0.56	-2.1
3,847,757	+		ABZR86_RS17015	0.70	-1.2
3,847,758	-		ABZR86_RS17015	0.70	-2.9
3,847,764	+		ABZR86_RS17015	0.71	-1.9
3,847,764	+		ABZR86_RS17015	0.71	-1.4
3,847,765	-		ABZR86_RS17015	0.71	-0.2
3,847,765	-		ABZR86_RS17015	0.71	-1.8
3,847,766	+		ABZR86_RS17015	0.71	-1.3
3,847,766	+		ABZR86_RS17015	0.71	-1.4
3,847,767	-		ABZR86_RS17015	0.71	-0.3
3,847,958	+		ABZR86_RS17015	0.78	-1.2
3,847,958	+		ABZR86_RS17015	0.78	-2.8
3,847,959	-		ABZR86_RS17015	0.78	-1.7
3,848,045	+		ABZR86_RS17015	0.81	-1.8
3,848,045	+		ABZR86_RS17015	0.81	-0.6
3,848,045	+		ABZR86_RS17015	0.81	-2.1
3,848,046	-		ABZR86_RS17015	0.81	-1.1
3,848,351	+				-1.0
3,848,351	+				-1.3
3,848,351	+				-1.5
3,848,352	-				-0.5
3,848,352	-				-1.1
3,848,352	-				-0.6
3,848,360	+				-2.2
3,848,360	+				-2.3
3,848,360	+				-1.0
3,848,361	-				-1.9
3,848,361	-				-0.4
3,848,411	+				-1.2
3,848,411	+				-0.0
3,848,523	-				-2.6
3,848,529	-				-1.4
3,848,529	-				-2.6
3,848,644	-				+0.4
3,848,696	+				-0.1
3,848,696	+				-0.3
3,848,697	-				-1.3
3,848,697	-				-1.2
3,848,697	-				+0.1
3,848,697	-				+0.4
3,849,000	-		ABZR86_RS17020	0.60	-0.5
3,849,000	-		ABZR86_RS17020	0.60	+0.1
3,849,000	-		ABZR86_RS17020	0.60	-0.6
3,849,041	+		ABZR86_RS17020	0.70	+0.4
3,849,041	+		ABZR86_RS17020	0.70	+0.2
3,849,042	-		ABZR86_RS17020	0.70	-1.4
3,849,042	-		ABZR86_RS17020	0.70	+0.7
3,849,065	+		ABZR86_RS17020	0.75	-0.8
3,849,065	+		ABZR86_RS17020	0.75	+0.2
3,849,066	-		ABZR86_RS17020	0.75	+0.3
3,849,066	-		ABZR86_RS17020	0.75	+0.1
3,849,066	-		ABZR86_RS17020	0.75	+0.1
3,849,066	-		ABZR86_RS17020	0.75	+0.4
3,849,116	+		ABZR86_RS17020	0.86	-0.9
3,849,116	+		ABZR86_RS17020	0.86	+0.1
3,849,116	+		ABZR86_RS17020	0.86	-0.7
3,849,116	+		ABZR86_RS17020	0.86	-0.4
3,849,116	+		ABZR86_RS17020	0.86	-0.9
3,849,116	+		ABZR86_RS17020	0.86	-0.1
3,849,117	-		ABZR86_RS17020	0.86	-0.0
3,849,117	-		ABZR86_RS17020	0.86	+0.5
3,849,117	-		ABZR86_RS17020	0.86	-0.5
3,849,117	-		ABZR86_RS17020	0.86	+0.1
3,849,117	-		ABZR86_RS17020	0.86	+0.0
3,849,117	-		ABZR86_RS17020	0.86	+0.3
3,849,117	-		ABZR86_RS17020	0.86	-0.4
3,849,176	+				-0.3
3,849,176	+				-1.5
3,849,177	-				+0.1
3,849,177	-				-0.4
3,849,444	+		ABZR86_RS17025	0.60	+0.9
3,849,444	+		ABZR86_RS17025	0.60	-0.1
3,849,445	-		ABZR86_RS17025	0.60	+0.2
3,849,445	-		ABZR86_RS17025	0.60	-0.3
3,849,445	-		ABZR86_RS17025	0.60	+0.2
3,849,448	-		ABZR86_RS17025	0.61	-0.2