Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16965

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,825,620	-		ABZR86_RS16955	0.62	-0.7
3,825,718	+		ABZR86_RS16955	0.69	+0.5
3,825,719	-		ABZR86_RS16955	0.69	+0.7
3,825,799	+		ABZR86_RS16955	0.76	-0.2
3,825,799	+		ABZR86_RS16955	0.76	-0.4
3,825,800	-		ABZR86_RS16955	0.76	-0.2
3,825,800	-		ABZR86_RS16955	0.76	+0.3
3,825,862	+		ABZR86_RS16955	0.81	+0.6
3,825,862	+		ABZR86_RS16955	0.81	-0.3
3,825,862	+		ABZR86_RS16955	0.81	+0.0
3,825,862	+		ABZR86_RS16955	0.81	+0.1
3,825,863	-		ABZR86_RS16955	0.81	-1.7
3,825,863	-		ABZR86_RS16955	0.81	-0.6
3,825,863	-		ABZR86_RS16955	0.81	+0.1
3,825,863	-		ABZR86_RS16955	0.81	-0.2
3,825,863	-		ABZR86_RS16955	0.81	-1.0
3,825,863	-		ABZR86_RS16955	0.81	-0.3
3,825,863	-		ABZR86_RS16955	0.81	-0.5
3,825,863	-		ABZR86_RS16955	0.81	-0.2
3,825,902	+		ABZR86_RS16955	0.84	-0.2
3,825,903	-		ABZR86_RS16955	0.84	+0.4
3,825,903	-		ABZR86_RS16955	0.84	-0.1
3,826,044	+				+0.6
3,826,045	-				+0.0
3,826,265	+		ABZR86_RS16960	0.47	+0.2
3,826,265	+		ABZR86_RS16960	0.47	-0.7
3,826,266	-		ABZR86_RS16960	0.47	-0.4
3,826,404	+		ABZR86_RS16960	0.88	-0.7
3,826,404	+		ABZR86_RS16960	0.88	-0.1
3,826,646	+				-0.4
3,826,647	-				-1.0
3,826,650	+				-0.9
3,826,650	+				-0.4
3,826,650	+				-1.9
3,826,650	+				-0.3
3,826,650	+				-2.5
3,826,650	+				-0.4
3,826,650	+				-1.3
3,826,650	+				+0.0
3,826,651	-				+0.3
3,826,651	-				-0.4
3,826,651	-				-1.8
3,826,651	-				+0.1
3,827,094	-		ABZR86_RS16965	0.23	-0.6
3,827,102	+		ABZR86_RS16965	0.24	-1.1
3,827,102	+		ABZR86_RS16965	0.24	-0.5
3,827,102	+		ABZR86_RS16965	0.24	-0.5
3,827,103	-		ABZR86_RS16965	0.24	+0.6
3,827,201	+		ABZR86_RS16965	0.28	-0.0
3,827,202	-		ABZR86_RS16965	0.28	-1.5
3,827,202	-		ABZR86_RS16965	0.28	-1.6
3,827,219	+		ABZR86_RS16965	0.29	+0.1
3,827,220	-		ABZR86_RS16965	0.29	-0.3
3,827,261	+		ABZR86_RS16965	0.31	-0.6
3,827,316	+		ABZR86_RS16965	0.33	-0.6
3,827,316	+		ABZR86_RS16965	0.33	-0.1
3,827,316	+		ABZR86_RS16965	0.33	-1.2
3,827,316	+		ABZR86_RS16965	0.33	-0.6
3,827,317	-		ABZR86_RS16965	0.33	-1.6
3,827,317	-		ABZR86_RS16965	0.33	-2.0
3,827,348	+		ABZR86_RS16965	0.35	-1.4
3,827,349	-		ABZR86_RS16965	0.35	-0.8
3,827,349	-		ABZR86_RS16965	0.35	-0.5
3,827,349	-		ABZR86_RS16965	0.35	-2.2
3,827,436	-		ABZR86_RS16965	0.39	-0.3
3,827,547	+		ABZR86_RS16965	0.44	+0.0
3,827,548	-		ABZR86_RS16965	0.44	-0.2
3,827,549	+		ABZR86_RS16965	0.44	-1.5
3,827,550	-		ABZR86_RS16965	0.44	-0.7
3,827,550	-		ABZR86_RS16965	0.44	-1.2
3,827,550	-		ABZR86_RS16965	0.44	-2.2
3,827,558	+		ABZR86_RS16965	0.44	-0.2
3,827,558	+		ABZR86_RS16965	0.44	-0.9
3,827,558	+		ABZR86_RS16965	0.44	+0.0
3,827,558	+		ABZR86_RS16965	0.44	-0.4
3,827,583	-		ABZR86_RS16965	0.45	-1.3
3,827,583	-		ABZR86_RS16965	0.45	-0.1
3,827,607	-		ABZR86_RS16965	0.46	-1.3
3,827,768	+		ABZR86_RS16965	0.54	-0.4
3,827,769	-		ABZR86_RS16965	0.54	-1.1
3,828,101	+		ABZR86_RS16965	0.69	-1.8
3,828,101	+		ABZR86_RS16965	0.69	-1.3
3,828,426	-		ABZR86_RS16965	0.83	-0.9
3,828,459	+		ABZR86_RS16965	0.85	-0.5
3,828,467	+		ABZR86_RS16965	0.85	+0.3
3,828,467	+		ABZR86_RS16965	0.85	-2.1
3,828,467	+		ABZR86_RS16965	0.85	-1.7
3,828,467	+		ABZR86_RS16965	0.85	+0.7
3,828,467	+		ABZR86_RS16965	0.85	+1.1
3,828,468	-		ABZR86_RS16965	0.85	-1.1
3,828,590	+				+2.0
3,828,590	+				+0.4
3,828,590	+				+1.6
3,828,693	+				+2.0
3,828,694	-				+0.7
3,828,722	-				-0.6
3,828,776	+				-0.4
3,828,777	-				-0.1
3,828,797	+				-0.2
3,828,797	+				-0.4
3,828,798	-				+0.2
3,828,798	-				+0.3
3,828,804	-				+0.8
3,829,012	+				+0.6
3,829,012	+				-1.6
3,829,050	+				-0.1
3,829,050	+				-0.6
3,829,050	+				+0.0
3,829,050	+				-0.4
3,829,050	+				+0.0
3,829,050	+				+0.2
3,829,050	+				-0.2
3,829,050	+				+0.2
3,829,050	+				-0.4
3,829,051	-				+0.5
3,829,051	-				-0.3
3,829,051	-				+0.3
3,829,051	-				-0.5
3,829,051	-				+0.7
3,829,051	-				+0.5
3,829,203	+		ABZR86_RS16970	0.65	-1.1
3,829,203	+		ABZR86_RS16970	0.65	+0.2
3,829,203	+		ABZR86_RS16970	0.65	+0.3
3,829,203	+		ABZR86_RS16970	0.65	-0.4
3,829,204	-		ABZR86_RS16970	0.65	+0.5
3,829,315	-				+0.5
3,829,315	-				-1.0
3,829,315	-				-2.3