Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16325

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,685,642	+		ABZR86_RS16320	0.79	-1.4
3,685,798	+		ABZR86_RS16320	0.84	-0.8
3,685,798	+		ABZR86_RS16320	0.84	-0.6
3,685,798	+		ABZR86_RS16320	0.84	-0.3
3,685,798	+		ABZR86_RS16320	0.84	-0.2
3,685,799	-		ABZR86_RS16320	0.84	-0.1
3,685,799	-		ABZR86_RS16320	0.84	+0.1
3,685,799	-		ABZR86_RS16320	0.84	+1.2
3,685,799	-		ABZR86_RS16320	0.84	-1.1
3,685,819	+		ABZR86_RS16320	0.85	-0.7
3,685,819	+		ABZR86_RS16320	0.85	-0.1
3,685,819	+		ABZR86_RS16320	0.85	-0.2
3,685,828	+		ABZR86_RS16320	0.85	+0.1
3,685,828	+		ABZR86_RS16320	0.85	-0.0
3,685,828	+		ABZR86_RS16320	0.85	+0.4
3,685,828	+		ABZR86_RS16320	0.85	-1.2
3,685,828	+		ABZR86_RS16320	0.85	-1.0
3,685,829	-		ABZR86_RS16320	0.85	-0.6
3,685,829	-		ABZR86_RS16320	0.85	-1.2
3,685,829	-		ABZR86_RS16320	0.85	-1.0
3,685,829	-		ABZR86_RS16320	0.85	+0.4
3,686,201	-				+0.4
3,686,201	-				-0.0
3,686,218	+				-0.8
3,686,218	+				-1.6
3,686,218	+				-0.4
3,686,218	+				-1.1
3,686,218	+				-0.6
3,686,218	+				+0.1
3,686,219	-				+0.0
3,686,219	-				-0.2
3,686,224	+				-0.3
3,686,224	+				-0.3
3,686,224	+				-0.5
3,686,224	+				+0.0
3,686,225	-				+0.8
3,686,225	-				-0.3
3,686,225	-				-0.7
3,687,315	-		ABZR86_RS16325	0.25	-0.6
3,687,315	-		ABZR86_RS16325	0.25	-0.4
3,687,377	+		ABZR86_RS16325	0.27	+0.7
3,687,377	+		ABZR86_RS16325	0.27	+0.1
3,687,377	+		ABZR86_RS16325	0.27	+0.5
3,687,377	+		ABZR86_RS16325	0.27	+0.4
3,687,377	+		ABZR86_RS16325	0.27	+0.4
3,687,377	+		ABZR86_RS16325	0.27	+0.2
3,687,377	+		ABZR86_RS16325	0.27	+0.1
3,687,377	+		ABZR86_RS16325	0.27	-0.6
3,687,378	-		ABZR86_RS16325	0.27	+0.4
3,687,378	-		ABZR86_RS16325	0.27	-0.6
3,687,378	-		ABZR86_RS16325	0.27	-0.0
3,687,378	-		ABZR86_RS16325	0.27	+0.4
3,687,378	-		ABZR86_RS16325	0.27	+0.2
3,687,378	-		ABZR86_RS16325	0.27	-0.5
3,687,455	+		ABZR86_RS16325	0.30	+0.4
3,687,456	-		ABZR86_RS16325	0.30	-0.2
3,687,486	-		ABZR86_RS16325	0.31	+0.0
3,687,659	+		ABZR86_RS16325	0.36	-1.0
3,687,659	+		ABZR86_RS16325	0.36	-0.2
3,687,660	-		ABZR86_RS16325	0.36	-1.4
3,687,660	-		ABZR86_RS16325	0.36	+0.5
3,687,660	-		ABZR86_RS16325	0.36	+0.0
3,688,076	+		ABZR86_RS16325	0.49	+0.1
3,688,076	+		ABZR86_RS16325	0.49	+0.2
3,688,077	-		ABZR86_RS16325	0.50	+0.4
3,688,077	-		ABZR86_RS16325	0.50	-0.4
3,688,077	-		ABZR86_RS16325	0.50	-0.1
3,688,077	-		ABZR86_RS16325	0.50	+1.1
3,688,211	-		ABZR86_RS16325	0.54	-1.4
3,688,309	-		ABZR86_RS16325	0.57	-1.0
3,688,530	-		ABZR86_RS16325	0.64	-0.3
3,688,530	-		ABZR86_RS16325	0.64	-0.0
3,688,530	-		ABZR86_RS16325	0.64	-0.4
3,688,766	+		ABZR86_RS16325	0.72	-1.1
3,688,766	+		ABZR86_RS16325	0.72	+0.2
3,688,766	+		ABZR86_RS16325	0.72	-0.0
3,688,767	-		ABZR86_RS16325	0.72	-0.4
3,688,847	+		ABZR86_RS16325	0.74	+0.5
3,688,847	+		ABZR86_RS16325	0.74	+0.4
3,688,847	+		ABZR86_RS16325	0.74	-0.2
3,688,847	+		ABZR86_RS16325	0.74	-0.1
3,688,847	+		ABZR86_RS16325	0.74	+0.1
3,688,848	-		ABZR86_RS16325	0.74	+0.1
3,688,848	-		ABZR86_RS16325	0.74	-0.3
3,688,943	+		ABZR86_RS16325	0.77	-0.2
3,688,943	+		ABZR86_RS16325	0.77	-0.1
3,688,944	-		ABZR86_RS16325	0.77	-0.4
3,688,961	-		ABZR86_RS16325	0.78	+4.7
3,688,961	-		ABZR86_RS16325	0.78	-0.0
3,689,138	+		ABZR86_RS16325	0.83	+0.6
3,689,138	+		ABZR86_RS16325	0.83	+0.2
3,689,138	+		ABZR86_RS16325	0.83	-1.7
3,689,138	+		ABZR86_RS16325	0.83	+0.9
3,689,138	+		ABZR86_RS16325	0.83	-0.1
3,689,138	+		ABZR86_RS16325	0.83	-0.1
3,689,139	-		ABZR86_RS16325	0.83	-0.6
3,689,139	-		ABZR86_RS16325	0.83	+0.3
3,689,139	-		ABZR86_RS16325	0.83	+0.6
3,689,139	-		ABZR86_RS16325	0.83	-0.3
3,689,139	-		ABZR86_RS16325	0.83	-0.3
3,689,139	-		ABZR86_RS16325	0.83	-1.1
3,689,140	+		ABZR86_RS16325	0.83	-0.8
3,689,141	-		ABZR86_RS16325	0.84	-1.4
3,689,141	-		ABZR86_RS16325	0.84	-0.3
3,689,141	-		ABZR86_RS16325	0.84	-0.4
3,689,141	-		ABZR86_RS16325	0.84	-0.2
3,689,239	+		ABZR86_RS16325	0.87	-0.1
3,689,239	+		ABZR86_RS16325	0.87	+0.3
3,689,239	+		ABZR86_RS16325	0.87	+0.6
3,689,498	-				+0.2
3,689,498	-				-0.1
3,689,561	+				+0.1
3,689,681	+				-0.2
3,689,681	+				-0.1
3,689,681	+				-0.8
3,689,682	-				+1.0
3,689,708	+				-0.2
3,689,709	-				-0.3
3,689,709	-				-2.1
3,689,797	+		ABZR86_RS16330	0.13	-0.4
3,689,798	-		ABZR86_RS16330	0.13	+0.6
3,689,798	-		ABZR86_RS16330	0.13	+0.1
3,689,898	+		ABZR86_RS16330	0.47	-1.1
3,689,898	+		ABZR86_RS16330	0.47	-0.1
3,689,899	-		ABZR86_RS16330	0.47	+0.1
3,689,899	-		ABZR86_RS16330	0.47	-0.1
3,689,899	-		ABZR86_RS16330	0.47	+0.6
3,689,900	+		ABZR86_RS16330	0.48	-1.4
3,689,900	+		ABZR86_RS16330	0.48	-0.6
3,689,901	-		ABZR86_RS16330	0.48	+0.2
3,689,901	-		ABZR86_RS16330	0.48	-1.3
3,689,901	-		ABZR86_RS16330	0.48	+0.7
3,689,901	-		ABZR86_RS16330	0.48	-0.3
3,689,901	-		ABZR86_RS16330	0.48	-1.7
3,689,901	-		ABZR86_RS16330	0.48	+0.5
3,689,901	-		ABZR86_RS16330	0.48	+0.0
3,689,901	-		ABZR86_RS16330	0.48	+0.8
3,689,946	+		ABZR86_RS16330	0.63	+0.1
3,689,947	-		ABZR86_RS16330	0.64	+0.4
3,689,947	-		ABZR86_RS16330	0.64	-0.3
3,689,947	-		ABZR86_RS16330	0.64	-0.4
3,690,104	+				+0.1
3,690,104	+				+0.2
3,690,104	+				+0.4
3,690,105	-				-0.5
3,690,105	-				+0.2
3,690,105	-				-0.4
3,690,105	-				+0.5
3,690,105	-				+1.3
3,690,353	+		ABZR86_RS16335	0.56	-1.0
3,690,353	+		ABZR86_RS16335	0.56	-1.7
3,690,353	+		ABZR86_RS16335	0.56	-0.7
3,690,353	+		ABZR86_RS16335	0.56	-1.0
3,690,354	-		ABZR86_RS16335	0.56	+0.7
3,690,354	-		ABZR86_RS16335	0.56	+0.0
3,690,354	-		ABZR86_RS16335	0.56	+0.0
3,690,354	-		ABZR86_RS16335	0.56	-0.9
3,690,354	-		ABZR86_RS16335	0.56	-1.5
3,690,410	+		ABZR86_RS16335	0.67	-0.7
3,690,410	+		ABZR86_RS16335	0.67	+0.3
3,690,411	-		ABZR86_RS16335	0.67	-1.7
3,690,411	-		ABZR86_RS16335	0.67	+0.4
3,690,518	+		ABZR86_RS16335	0.88	-0.4
3,690,518	+		ABZR86_RS16335	0.88	-0.9
3,690,519	-		ABZR86_RS16335	0.88	-0.9
3,690,578	+				-2.4
3,690,579	-				-0.4