Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16140

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,645,896	+		ABZR86_RS16135	0.53	-0.2
3,645,896	+		ABZR86_RS16135	0.53	+0.3
3,645,896	+		ABZR86_RS16135	0.53	+0.3
3,645,896	+		ABZR86_RS16135	0.53	-0.7
3,645,897	-		ABZR86_RS16135	0.53	+0.4
3,645,897	-		ABZR86_RS16135	0.53	-2.2
3,645,897	-		ABZR86_RS16135	0.53	+0.1
3,645,897	-		ABZR86_RS16135	0.53	-0.6
3,645,932	+		ABZR86_RS16135	0.55	-0.5
3,645,932	+		ABZR86_RS16135	0.55	-0.4
3,645,932	+		ABZR86_RS16135	0.55	-0.5
3,645,932	+		ABZR86_RS16135	0.55	-0.6
3,645,932	+		ABZR86_RS16135	0.55	-0.8
3,645,933	-		ABZR86_RS16135	0.55	-0.2
3,645,933	-		ABZR86_RS16135	0.55	+0.3
3,645,933	-		ABZR86_RS16135	0.55	-1.7
3,645,933	-		ABZR86_RS16135	0.55	-0.4
3,645,933	-		ABZR86_RS16135	0.55	+0.3
3,645,950	+		ABZR86_RS16135	0.56	+0.4
3,645,950	+		ABZR86_RS16135	0.56	+0.5
3,645,950	+		ABZR86_RS16135	0.56	-0.5
3,645,950	+		ABZR86_RS16135	0.56	+0.3
3,645,950	+		ABZR86_RS16135	0.56	+1.7
3,645,951	-		ABZR86_RS16135	0.56	+0.4
3,645,951	-		ABZR86_RS16135	0.56	+0.4
3,645,951	-		ABZR86_RS16135	0.56	-0.4
3,645,954	-		ABZR86_RS16135	0.56	-1.5
3,646,040	+		ABZR86_RS16135	0.60	-0.3
3,646,040	+		ABZR86_RS16135	0.60	-0.4
3,646,145	+		ABZR86_RS16135	0.66	+0.3
3,646,145	+		ABZR86_RS16135	0.66	+0.4
3,646,145	+		ABZR86_RS16135	0.66	+0.3
3,646,145	+		ABZR86_RS16135	0.66	-0.4
3,646,146	-		ABZR86_RS16135	0.66	+2.7
3,646,146	-		ABZR86_RS16135	0.66	-0.8
3,646,146	-		ABZR86_RS16135	0.66	+1.4
3,646,146	-		ABZR86_RS16135	0.66	+0.2
3,646,148	+		ABZR86_RS16135	0.66	-0.1
3,646,148	+		ABZR86_RS16135	0.66	+0.5
3,646,149	-		ABZR86_RS16135	0.66	-0.7
3,646,280	+		ABZR86_RS16135	0.73	+0.6
3,646,281	-		ABZR86_RS16135	0.73	+0.6
3,646,281	-		ABZR86_RS16135	0.73	+0.1
3,646,281	-		ABZR86_RS16135	0.73	+0.1
3,646,326	-		ABZR86_RS16135	0.75	-0.0
3,646,326	-		ABZR86_RS16135	0.75	-0.6
3,646,361	+		ABZR86_RS16135	0.77	-0.5
3,646,361	+		ABZR86_RS16135	0.77	+0.1
3,646,362	-		ABZR86_RS16135	0.77	-0.5
3,646,484	+		ABZR86_RS16135	0.84	-0.0
3,646,485	-		ABZR86_RS16135	0.84	+0.4
3,646,485	-		ABZR86_RS16135	0.84	+0.7
3,646,485	-		ABZR86_RS16135	0.84	+1.6
3,646,712	+				-0.3
3,646,794	-				-0.0
3,646,794	-				-0.4
3,646,846	+				+0.2
3,646,846	+				-1.2
3,646,847	-				-1.1
3,646,897	+				-0.2
3,646,948	+		ABZR86_RS16140	0.13	+0.1
3,646,949	-		ABZR86_RS16140	0.13	-0.3
3,646,949	-		ABZR86_RS16140	0.13	-1.1
3,646,960	+		ABZR86_RS16140	0.15	-0.4
3,646,960	+		ABZR86_RS16140	0.15	+0.4
3,646,960	+		ABZR86_RS16140	0.15	-0.2
3,646,960	+		ABZR86_RS16140	0.15	-0.3
3,646,960	+		ABZR86_RS16140	0.15	-0.7
3,646,960	+		ABZR86_RS16140	0.15	-0.5
3,646,961	-		ABZR86_RS16140	0.15	-1.6
3,646,961	-		ABZR86_RS16140	0.15	-1.1
3,646,961	-		ABZR86_RS16140	0.15	-1.9
3,646,961	-		ABZR86_RS16140	0.15	-1.3
3,646,961	-		ABZR86_RS16140	0.15	-1.0
3,646,961	-		ABZR86_RS16140	0.15	-1.6
3,646,961	-		ABZR86_RS16140	0.15	-2.3
3,646,961	-		ABZR86_RS16140	0.15	-2.5
3,646,961	-		ABZR86_RS16140	0.15	-0.3
3,646,961	-		ABZR86_RS16140	0.15	-0.7
3,646,961	-		ABZR86_RS16140	0.15	-1.0
3,646,961	-		ABZR86_RS16140	0.15	-1.4
3,646,961	-		ABZR86_RS16140	0.15	-0.4
3,646,961	-		ABZR86_RS16140	0.15	+0.2
3,647,005	+		ABZR86_RS16140	0.23	-0.0
3,647,005	+		ABZR86_RS16140	0.23	-1.3
3,647,006	-		ABZR86_RS16140	0.23	-0.5
3,647,027	-		ABZR86_RS16140	0.26	-1.5
3,647,027	-		ABZR86_RS16140	0.26	-0.7
3,647,104	+		ABZR86_RS16140	0.39	-1.2
3,647,104	+		ABZR86_RS16140	0.39	-0.2
3,647,137	+		ABZR86_RS16140	0.45	+0.3
3,647,137	+		ABZR86_RS16140	0.45	-0.8
3,647,138	-		ABZR86_RS16140	0.45	-1.3
3,647,138	-		ABZR86_RS16140	0.45	-0.6
3,647,138	-		ABZR86_RS16140	0.45	+0.2
3,647,138	-		ABZR86_RS16140	0.45	-0.8
3,647,146	+		ABZR86_RS16140	0.46	+0.1
3,647,146	+		ABZR86_RS16140	0.46	+0.1
3,647,146	+		ABZR86_RS16140	0.46	-1.7
3,647,146	+		ABZR86_RS16140	0.46	+0.7
3,647,147	-		ABZR86_RS16140	0.47	-0.1
3,647,147	-		ABZR86_RS16140	0.47	-0.6
3,647,209	+		ABZR86_RS16140	0.57	-0.5
3,647,209	+		ABZR86_RS16140	0.57	+0.5
3,647,210	-		ABZR86_RS16140	0.57	-0.2
3,647,236	+		ABZR86_RS16140	0.61	-0.0
3,647,236	+		ABZR86_RS16140	0.61	+0.1
3,647,258	+		ABZR86_RS16140	0.65	-0.4
3,647,258	+		ABZR86_RS16140	0.65	-1.0
3,647,258	+		ABZR86_RS16140	0.65	-0.8
3,647,258	+		ABZR86_RS16140	0.65	-0.1
3,647,258	+		ABZR86_RS16140	0.65	+0.2
3,647,259	-		ABZR86_RS16140	0.65	-1.1
3,647,259	-		ABZR86_RS16140	0.65	-0.8
3,647,259	-		ABZR86_RS16140	0.65	-0.9
3,647,259	-		ABZR86_RS16140	0.65	+0.2
3,647,329	+		ABZR86_RS16140	0.77	-0.4
3,647,330	-		ABZR86_RS16140	0.77	-0.1
3,647,330	-		ABZR86_RS16140	0.77	-1.7
3,647,330	-		ABZR86_RS16140	0.77	-1.2
3,647,508	+				-0.7
3,647,508	+				-0.5
3,647,508	+				-0.2
3,647,508	+				-0.4
3,647,666	+				+0.2
3,647,667	-				+1.7
3,647,667	-				-1.0
3,647,667	-				-1.1
3,647,667	-				-0.6
3,647,667	-				+0.5
3,647,683	-				-0.0
3,647,683	-				+0.1
3,648,057	+		ABZR86_RS16145	0.17	+0.1
3,648,058	-		ABZR86_RS16145	0.17	+0.3
3,648,210	+		ABZR86_RS16145	0.25	-0.0
3,648,210	+		ABZR86_RS16145	0.25	+0.3
3,648,211	-		ABZR86_RS16145	0.25	-0.6
3,648,211	-		ABZR86_RS16145	0.25	+1.1
3,648,357	+		ABZR86_RS16145	0.33	-2.4
3,648,369	+		ABZR86_RS16145	0.33	+0.5
3,648,369	+		ABZR86_RS16145	0.33	+0.0
3,648,369	+		ABZR86_RS16145	0.33	+0.5
3,648,369	+		ABZR86_RS16145	0.33	-0.2
3,648,370	-		ABZR86_RS16145	0.33	+0.2
3,648,444	+		ABZR86_RS16145	0.37	+0.8
3,648,444	+		ABZR86_RS16145	0.37	+0.1
3,648,445	-		ABZR86_RS16145	0.37	+0.4
3,648,445	-		ABZR86_RS16145	0.37	+0.6