Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS15410

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,466,625	+		ABZR86_RS15405	0.28	-1.7
3,466,625	+		ABZR86_RS15405	0.28	-1.3
3,466,626	-		ABZR86_RS15405	0.28	-4.2
3,466,629	+		ABZR86_RS15405	0.28	-1.4
3,466,629	+		ABZR86_RS15405	0.28	-0.3
3,466,629	+		ABZR86_RS15405	0.28	-3.1
3,466,629	+		ABZR86_RS15405	0.28	-1.5
3,466,629	+		ABZR86_RS15405	0.28	-2.8
3,466,629	+		ABZR86_RS15405	0.28	-2.7
3,466,630	-		ABZR86_RS15405	0.29	-1.8
3,466,644	+		ABZR86_RS15405	0.30	-3.3
3,466,644	+		ABZR86_RS15405	0.30	-2.3
3,466,644	+		ABZR86_RS15405	0.30	-0.6
3,466,645	-		ABZR86_RS15405	0.30	-2.9
3,466,645	-		ABZR86_RS15405	0.30	-3.2
3,466,645	-		ABZR86_RS15405	0.30	-1.6
3,466,645	-		ABZR86_RS15405	0.30	-2.2
3,466,821	+		ABZR86_RS15405	0.45	-1.4
3,466,821	+		ABZR86_RS15405	0.45	-1.6
3,466,821	+		ABZR86_RS15405	0.45	-1.3
3,466,821	+		ABZR86_RS15405	0.45	-1.5
3,466,821	+		ABZR86_RS15405	0.45	-1.4
3,466,821	+		ABZR86_RS15405	0.45	-2.3
3,466,821	+		ABZR86_RS15405	0.45	-3.4
3,466,822	-		ABZR86_RS15405	0.45	-2.2
3,466,822	-		ABZR86_RS15405	0.45	-4.1
3,466,822	-		ABZR86_RS15405	0.45	-1.8
3,466,822	-		ABZR86_RS15405	0.45	-2.2
3,466,822	-		ABZR86_RS15405	0.45	-1.5
3,466,822	-		ABZR86_RS15405	0.45	-2.1
3,466,845	+		ABZR86_RS15405	0.47	+0.4
3,466,846	-		ABZR86_RS15405	0.47	-1.4
3,466,851	+		ABZR86_RS15405	0.47	-1.8
3,466,851	+		ABZR86_RS15405	0.47	-2.2
3,466,851	+		ABZR86_RS15405	0.47	-1.7
3,466,851	+		ABZR86_RS15405	0.47	-3.1
3,466,851	+		ABZR86_RS15405	0.47	-2.3
3,466,852	-		ABZR86_RS15405	0.47	-2.9
3,466,852	-		ABZR86_RS15405	0.47	-0.8
3,466,852	-		ABZR86_RS15405	0.47	-1.7
3,466,852	-		ABZR86_RS15405	0.47	-1.8
3,466,852	-		ABZR86_RS15405	0.47	-0.9
3,466,852	-		ABZR86_RS15405	0.47	-3.5
3,466,852	-		ABZR86_RS15405	0.47	-0.9
3,466,975	+		ABZR86_RS15405	0.57	-3.6
3,466,975	+		ABZR86_RS15405	0.57	-1.6
3,466,976	-		ABZR86_RS15405	0.58	+1.4
3,466,976	-		ABZR86_RS15405	0.58	-2.3
3,467,181	+		ABZR86_RS15405	0.75	-1.7
3,467,259	+		ABZR86_RS15405	0.81	-1.7
3,467,259	+		ABZR86_RS15405	0.81	-3.9
3,467,259	+		ABZR86_RS15405	0.81	-0.5
3,467,260	-		ABZR86_RS15405	0.81	-1.7
3,467,260	-		ABZR86_RS15405	0.81	-1.9
3,467,499	+				-1.5
3,467,500	-				-1.2
3,467,500	-				-1.2
3,467,540	+				-1.4
3,467,540	+				-1.2
3,467,540	+				-0.1
3,467,540	+				-1.3
3,467,540	+				-1.6
3,467,541	-				-1.0
3,467,541	-				+0.7
3,467,541	-				+0.3
3,467,541	-				-2.0
3,467,541	-				-1.7
3,467,541	-				-1.7
3,467,541	-				-1.5
3,467,546	+				-2.0
3,467,546	+				-3.0
3,467,873	+		ABZR86_RS15410	0.26	-1.7
3,467,873	+		ABZR86_RS15410	0.26	-2.1
3,467,873	+		ABZR86_RS15410	0.26	-1.7
3,467,873	+		ABZR86_RS15410	0.26	-3.3
3,467,873	+		ABZR86_RS15410	0.26	-1.1
3,467,873	+		ABZR86_RS15410	0.26	-2.1
3,467,873	+		ABZR86_RS15410	0.26	-1.0
3,467,873	+		ABZR86_RS15410	0.26	-2.1
3,467,873	+		ABZR86_RS15410	0.26	-1.4
3,467,873	+		ABZR86_RS15410	0.26	-0.2
3,467,873	+		ABZR86_RS15410	0.26	-1.4
3,467,873	+		ABZR86_RS15410	0.26	-2.3
3,467,874	-		ABZR86_RS15410	0.26	-4.4
3,467,874	-		ABZR86_RS15410	0.26	-1.5
3,467,874	-		ABZR86_RS15410	0.26	-0.6
3,467,874	-		ABZR86_RS15410	0.26	-2.2
3,467,874	-		ABZR86_RS15410	0.26	-1.2
3,467,874	-		ABZR86_RS15410	0.26	+0.2
3,467,874	-		ABZR86_RS15410	0.26	-3.1
3,467,874	-		ABZR86_RS15410	0.26	-2.4
3,467,877	+		ABZR86_RS15410	0.26	-2.5
3,467,877	+		ABZR86_RS15410	0.26	-2.1
3,467,877	+		ABZR86_RS15410	0.26	-0.8
3,467,877	+		ABZR86_RS15410	0.26	-2.2
3,467,877	+		ABZR86_RS15410	0.26	-1.9
3,467,877	+		ABZR86_RS15410	0.26	-2.2
3,467,878	-		ABZR86_RS15410	0.26	-2.5
3,467,878	-		ABZR86_RS15410	0.26	-1.7
3,467,878	-		ABZR86_RS15410	0.26	-1.3
3,468,103	-		ABZR86_RS15410	0.50	-1.7
3,468,135	+		ABZR86_RS15410	0.53	-2.1
3,468,135	+		ABZR86_RS15410	0.53	-0.4
3,468,135	+		ABZR86_RS15410	0.53	-1.8
3,468,136	-		ABZR86_RS15410	0.53	-1.8
3,468,147	+		ABZR86_RS15410	0.55	-2.4
3,468,147	+		ABZR86_RS15410	0.55	-2.6
3,468,147	+		ABZR86_RS15410	0.55	-1.3
3,468,148	-		ABZR86_RS15410	0.55	-1.9
3,468,148	-		ABZR86_RS15410	0.55	-1.8
3,468,198	+		ABZR86_RS15410	0.60	-1.4
3,468,198	+		ABZR86_RS15410	0.60	-1.5
3,468,198	+		ABZR86_RS15410	0.60	-0.4
3,468,198	+		ABZR86_RS15410	0.60	-2.7
3,468,198	+		ABZR86_RS15410	0.60	-1.1
3,468,198	+		ABZR86_RS15410	0.60	-0.7
3,468,198	+		ABZR86_RS15410	0.60	-2.2
3,468,198	+		ABZR86_RS15410	0.60	-1.2
3,468,198	+		ABZR86_RS15410	0.60	-1.8
3,468,198	+		ABZR86_RS15410	0.60	-2.2
3,468,198	+		ABZR86_RS15410	0.60	-2.2
3,468,198	+		ABZR86_RS15410	0.60	-2.1
3,468,198	+		ABZR86_RS15410	0.60	-1.5
3,468,198	+		ABZR86_RS15410	0.60	-1.3
3,468,198	+		ABZR86_RS15410	0.60	-2.2
3,468,198	+		ABZR86_RS15410	0.60	-1.8
3,468,198	+		ABZR86_RS15410	0.60	-2.9
3,468,198	+		ABZR86_RS15410	0.60	-3.2
3,468,198	+		ABZR86_RS15410	0.60	-1.3
3,468,198	+		ABZR86_RS15410	0.60	-1.6
3,468,198	+		ABZR86_RS15410	0.60	-2.4
3,468,198	+		ABZR86_RS15410	0.60	-2.7
3,468,198	+		ABZR86_RS15410	0.60	-2.6
3,468,198	+		ABZR86_RS15410	0.60	-1.6
3,468,198	+		ABZR86_RS15410	0.60	-2.1
3,468,198	+		ABZR86_RS15410	0.60	-0.1
3,468,198	+		ABZR86_RS15410	0.60	-2.5
3,468,198	+		ABZR86_RS15410	0.60	-1.2
3,468,198	+		ABZR86_RS15410	0.60	-2.2
3,468,198	+		ABZR86_RS15410	0.60	-2.4
3,468,199	-		ABZR86_RS15410	0.60	-0.8
3,468,199	-		ABZR86_RS15410	0.60	-1.0
3,468,199	-		ABZR86_RS15410	0.60	-1.1
3,468,199	-		ABZR86_RS15410	0.60	-1.1
3,468,199	-		ABZR86_RS15410	0.60	-0.8
3,468,199	-		ABZR86_RS15410	0.60	-1.4
3,468,199	-		ABZR86_RS15410	0.60	-1.4
3,468,199	-		ABZR86_RS15410	0.60	-1.4
3,468,199	-		ABZR86_RS15410	0.60	-1.8
3,468,199	-		ABZR86_RS15410	0.60	-2.6
3,468,199	-		ABZR86_RS15410	0.60	+2.3
3,468,199	-		ABZR86_RS15410	0.60	-2.9
3,468,199	-		ABZR86_RS15410	0.60	-2.0
3,468,199	-		ABZR86_RS15410	0.60	-1.2
3,468,199	-		ABZR86_RS15410	0.60	-0.4
3,468,199	-		ABZR86_RS15410	0.60	-2.8
3,468,199	-		ABZR86_RS15410	0.60	-1.4
3,468,199	-		ABZR86_RS15410	0.60	-1.7
3,468,199	-		ABZR86_RS15410	0.60	-3.9
3,468,199	-		ABZR86_RS15410	0.60	-0.7
3,468,199	-		ABZR86_RS15410	0.60	-2.0
3,468,199	-		ABZR86_RS15410	0.60	-0.9
3,468,199	-		ABZR86_RS15410	0.60	-3.3
3,468,199	-		ABZR86_RS15410	0.60	-0.9
3,468,199	-		ABZR86_RS15410	0.60	-1.4
3,468,199	-		ABZR86_RS15410	0.60	-2.7
3,468,199	-		ABZR86_RS15410	0.60	-2.6
3,468,199	-		ABZR86_RS15410	0.60	-2.5
3,468,199	-		ABZR86_RS15410	0.60	-2.8
3,468,199	-		ABZR86_RS15410	0.60	-3.0
3,468,199	-		ABZR86_RS15410	0.60	-2.0
3,468,199	-		ABZR86_RS15410	0.60	-1.9
3,468,199	-		ABZR86_RS15410	0.60	-2.9
3,468,199	-		ABZR86_RS15410	0.60	-2.8
3,468,199	-		ABZR86_RS15410	0.60	-1.6
3,468,199	-		ABZR86_RS15410	0.60	-1.3
3,468,199	-		ABZR86_RS15410	0.60	-1.9
3,468,199	-		ABZR86_RS15410	0.60	-1.3
3,468,199	-		ABZR86_RS15410	0.60	-1.8
3,468,199	-		ABZR86_RS15410	0.60	-1.8
3,468,199	-		ABZR86_RS15410	0.60	-1.5
3,468,199	-		ABZR86_RS15410	0.60	-2.9
3,468,199	-		ABZR86_RS15410	0.60	-1.8
3,468,204	+		ABZR86_RS15410	0.61	-1.8
3,468,204	+		ABZR86_RS15410	0.61	-0.7
3,468,205	-		ABZR86_RS15410	0.61	-2.7
3,468,205	-		ABZR86_RS15410	0.61	-1.9
3,468,438	+		ABZR86_RS15410	0.85	-1.6
3,468,438	+		ABZR86_RS15410	0.85	-2.2
3,468,438	+		ABZR86_RS15410	0.85	-1.0
3,468,439	-		ABZR86_RS15410	0.85	-1.3
3,468,479	+		ABZR86_RS15410	0.89	-0.8
3,468,525	+				+2.0
3,468,526	-				+2.3
3,468,637	+				+0.1
3,468,657	+				-0.8
3,468,658	-				+0.3
3,468,658	-				-0.1
3,468,658	-				-0.4
3,468,694	+				-1.7
3,468,695	-				-1.4
3,468,695	-				-1.2
3,468,695	-				-0.1
3,468,695	-				-0.9
3,468,695	-				+0.6
3,468,695	-				+0.2
3,468,695	-				-0.3
3,468,791	+				-0.4
3,468,791	+				-1.0
3,468,791	+				-0.1
3,468,792	-				-0.0
3,468,792	-				-0.1
3,468,792	-				+0.2
3,468,921	+		ABZR86_RS15415	0.88	-1.2
3,468,922	-		ABZR86_RS15415	0.89	+0.6
3,468,947	+				+0.4
3,468,948	-				+0.8
3,468,948	-				-0.5
3,468,948	-				-0.4
3,468,948	-				+0.0
3,468,953	+				-0.1
3,468,953	+				-0.7
3,468,954	-				+0.1
3,469,086	-				-1.1
3,469,262	+		ABZR86_RS15420	0.36	-0.3
3,469,262	+		ABZR86_RS15420	0.36	-0.5
3,469,262	+		ABZR86_RS15420	0.36	+0.1
3,469,263	-		ABZR86_RS15420	0.36	-0.5
3,469,263	-		ABZR86_RS15420	0.36	-0.2
3,469,263	-		ABZR86_RS15420	0.36	-0.4
3,469,263	-		ABZR86_RS15420	0.36	+0.2
3,469,263	-		ABZR86_RS15420	0.36	+0.2
3,469,263	-		ABZR86_RS15420	0.36	-0.7
3,469,263	-		ABZR86_RS15420	0.36	+0.1
3,469,263	-		ABZR86_RS15420	0.36	-0.3
3,469,271	+		ABZR86_RS15420	0.37	-0.2
3,469,272	-		ABZR86_RS15420	0.38	-0.5
3,469,349	-		ABZR86_RS15420	0.52	+0.6
3,469,405	+		ABZR86_RS15420	0.62	+0.6
3,469,406	-		ABZR86_RS15420	0.62	-0.9
3,469,406	-		ABZR86_RS15420	0.62	-0.3
3,469,438	+		ABZR86_RS15420	0.68	+0.7
3,469,438	+		ABZR86_RS15420	0.68	+1.4
3,469,438	+		ABZR86_RS15420	0.68	+0.5
3,469,438	+		ABZR86_RS15420	0.68	-0.1
3,469,439	-		ABZR86_RS15420	0.68	-1.2
3,469,439	-		ABZR86_RS15420	0.68	-0.5
3,469,439	-		ABZR86_RS15420	0.68	-0.2
3,469,439	-		ABZR86_RS15420	0.68	-0.1
3,469,439	-		ABZR86_RS15420	0.68	+0.1
3,469,439	-		ABZR86_RS15420	0.68	-0.9
3,469,441	+		ABZR86_RS15420	0.68	-1.5
3,469,442	-		ABZR86_RS15420	0.68	-1.4
3,469,468	+		ABZR86_RS15420	0.73	-0.1
3,469,468	+		ABZR86_RS15420	0.73	+0.4
3,469,488	+		ABZR86_RS15420	0.77	+0.3
3,469,488	+		ABZR86_RS15420	0.77	+0.3
3,469,489	-		ABZR86_RS15420	0.77	-0.2
3,469,489	-		ABZR86_RS15420	0.77	+0.5
3,469,489	-		ABZR86_RS15420	0.77	-0.3
3,469,489	-		ABZR86_RS15420	0.77	-0.5
3,469,490	+		ABZR86_RS15420	0.77	+0.1
3,469,490	+		ABZR86_RS15420	0.77	+0.5
3,469,490	+		ABZR86_RS15420	0.77	+0.7
3,469,490	+		ABZR86_RS15420	0.77	-1.6
3,469,491	-		ABZR86_RS15420	0.77	-0.2
3,469,491	-		ABZR86_RS15420	0.77	+0.2
3,469,491	-		ABZR86_RS15420	0.77	-0.1
3,469,574	+				+0.4
3,469,574	+				+0.3
3,469,575	-				-0.5
3,469,575	-				-0.8
3,469,575	-				-1.1
3,469,575	-				-0.8
3,469,575	-				-2.3