Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS15265

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,438,987	+				+3.5
3,439,178	-		ABZR86_RS15260	0.19	-1.2
3,439,246	+		ABZR86_RS15260	0.37	+3.8
3,439,324	+		ABZR86_RS15260	0.58	+4.1
3,439,324	+		ABZR86_RS15260	0.58	+4.6
3,439,324	+		ABZR86_RS15260	0.58	+4.3
3,439,325	-		ABZR86_RS15260	0.58	-0.7
3,439,325	-		ABZR86_RS15260	0.58	-1.6
3,439,325	-		ABZR86_RS15260	0.58	-0.6
3,439,325	-		ABZR86_RS15260	0.58	-0.0
3,439,466	+				+5.9
3,439,466	+				+6.7
3,439,466	+				+6.2
3,439,467	-				+0.0
3,439,467	-				-0.2
3,439,467	-				-0.6
3,439,467	-				-0.4
3,439,467	-				+0.8
3,439,467	-				-0.6
3,439,467	-				+0.1
3,439,467	-				-0.9
3,439,467	-				+0.2
3,439,467	-				+0.0
3,439,629	-				-0.6
3,439,629	-				-0.6
3,439,629	-				-0.6
3,439,629	-				-1.1
3,439,629	-				-3.7
3,439,629	-				-0.8
3,439,665	-				-4.2
3,439,665	-				-2.4
3,439,665	-				-3.5
3,440,037	-		ABZR86_RS15265	0.63	-1.7
3,440,048	+		ABZR86_RS15265	0.65	-3.3
3,440,048	+		ABZR86_RS15265	0.65	-1.3
3,440,048	+		ABZR86_RS15265	0.65	-2.2
3,440,048	+		ABZR86_RS15265	0.65	-1.9
3,440,049	-		ABZR86_RS15265	0.65	-2.0
3,440,049	-		ABZR86_RS15265	0.65	-2.5
3,440,049	-		ABZR86_RS15265	0.65	-2.8
3,440,049	-		ABZR86_RS15265	0.65	-3.2
3,440,049	-		ABZR86_RS15265	0.65	+0.3
3,440,049	-		ABZR86_RS15265	0.65	-1.9
3,440,066	+		ABZR86_RS15265	0.68	-2.0
3,440,066	+		ABZR86_RS15265	0.68	-3.8
3,440,066	+		ABZR86_RS15265	0.68	-2.0
3,440,066	+		ABZR86_RS15265	0.68	-2.6
3,440,067	-		ABZR86_RS15265	0.68	-3.3
3,440,067	-		ABZR86_RS15265	0.68	-2.2
3,440,067	-		ABZR86_RS15265	0.68	-1.8
3,440,067	-		ABZR86_RS15265	0.68	-2.8
3,440,168	+		ABZR86_RS15265	0.85	-1.9
3,440,169	-		ABZR86_RS15265	0.85	-2.6
3,440,195	+		ABZR86_RS15265	0.89	-2.8
3,440,231	+				-0.1
3,440,265	+				-1.5
3,440,265	+				-0.8
3,440,266	-				+0.8
3,440,266	-				-0.8
3,440,472	+				-0.4
3,440,472	+				-0.1
3,440,472	+				-1.5
3,440,472	+				-0.7
3,440,472	+				-0.2
3,440,472	+				-0.0
3,440,473	-				-0.7
3,440,473	-				-1.3
3,440,473	-				+0.1
3,440,473	-				-0.7
3,440,712	+		ABZR86_RS15275	0.62	+0.2
3,440,713	-		ABZR86_RS15275	0.62	+0.1
3,440,713	-		ABZR86_RS15275	0.62	-0.2
3,440,713	-		ABZR86_RS15275	0.62	+0.3
3,440,805	+		ABZR86_RS15275	0.85	+0.0
3,440,805	+		ABZR86_RS15275	0.85	-0.8
3,440,806	-		ABZR86_RS15275	0.85	+0.5
3,440,806	-		ABZR86_RS15275	0.85	+0.2
3,441,036	+		ABZR86_RS15280	0.12	-1.4
3,441,047	+		ABZR86_RS15280	0.13	-2.2
3,441,047	+		ABZR86_RS15280	0.13	-1.7
3,441,128	-		ABZR86_RS15280	0.25	-3.2
3,441,128	-		ABZR86_RS15280	0.25	-0.7