Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS14555

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,258,433	-				+1.0
3,258,539	+				-0.1
3,258,539	+				+0.1
3,258,539	+				-1.2
3,258,539	+				+0.0
3,258,540	-				+0.6
3,258,540	-				-0.2
3,258,540	-				+0.9
3,258,921	+		ABZR86_RS14550	0.64	-0.1
3,258,922	-		ABZR86_RS14550	0.64	-0.2
3,258,942	+		ABZR86_RS14550	0.68	-0.0
3,258,942	+		ABZR86_RS14550	0.68	+0.3
3,258,978	+		ABZR86_RS14550	0.76	+0.4
3,259,089	+				-0.2
3,259,090	-				-0.2
3,259,090	-				+0.9
3,259,143	+				-0.9
3,259,143	+				+0.3
3,259,143	+				+1.4
3,259,143	+				-2.3
3,259,143	+				-0.1
3,259,144	-				-0.4
3,259,144	-				-0.9
3,259,144	-				-0.2
3,259,152	+				+1.8
3,259,152	+				+0.8
3,259,152	+				-0.9
3,259,153	-				-0.6
3,259,153	-				-0.1
3,259,166	+				+0.5
3,259,246	+				+1.0
3,259,388	-		ABZR86_RS14555	0.20	-0.8
3,259,450	+		ABZR86_RS14555	0.29	-0.2
3,259,450	+		ABZR86_RS14555	0.29	-1.0
3,259,451	-		ABZR86_RS14555	0.29	-0.1
3,259,451	-		ABZR86_RS14555	0.29	-1.3
3,259,456	+		ABZR86_RS14555	0.30	+0.2
3,259,457	-		ABZR86_RS14555	0.30	-0.1
3,259,558	+		ABZR86_RS14555	0.45	-0.4
3,259,687	+		ABZR86_RS14555	0.63	+0.5
3,259,688	-		ABZR86_RS14555	0.63	+1.2
3,259,747	+		ABZR86_RS14555	0.72	-0.7
3,259,747	+		ABZR86_RS14555	0.72	+0.4
3,259,747	+		ABZR86_RS14555	0.72	+0.8
3,259,747	+		ABZR86_RS14555	0.72	-0.8
3,259,748	-		ABZR86_RS14555	0.72	-0.4
3,259,748	-		ABZR86_RS14555	0.72	-0.4
3,259,748	-		ABZR86_RS14555	0.72	-0.6
3,259,748	-		ABZR86_RS14555	0.72	-0.0
3,259,844	+		ABZR86_RS14555	0.85	-2.4
3,259,845	-		ABZR86_RS14555	0.85	-0.4
3,260,085	+				+0.4
3,260,085	+				-0.5
3,260,224	+		ABZR86_RS14560	0.11	-0.3
3,260,225	-		ABZR86_RS14560	0.12	-1.0
3,260,593	+		ABZR86_RS14560	0.52	-0.8
3,260,594	-		ABZR86_RS14560	0.52	-0.7
3,260,699	-		ABZR86_RS14560	0.63	+0.2
3,260,851	+		ABZR86_RS14560	0.80	-0.3
3,260,851	+		ABZR86_RS14560	0.80	+0.1
3,260,852	-		ABZR86_RS14560	0.80	-0.2
3,260,926	+		ABZR86_RS14560	0.88	-0.2
3,260,926	+		ABZR86_RS14560	0.88	-0.7
3,260,926	+		ABZR86_RS14560	0.88	-0.1
3,260,927	-		ABZR86_RS14560	0.88	-0.9
3,260,927	-		ABZR86_RS14560	0.88	-0.5
3,260,927	-		ABZR86_RS14560	0.88	+0.2
3,260,927	-		ABZR86_RS14560	0.88	+0.1