Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13895

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
3,096,521	+		ABZR86_RS13890	0.45	+0.4
3,096,521	+		ABZR86_RS13890	0.45	+0.4
3,096,522	-		ABZR86_RS13890	0.45	+0.7
3,097,043	+		ABZR86_RS13890	0.85	-0.8
3,097,043	+		ABZR86_RS13890	0.85	-0.3
3,097,044	-		ABZR86_RS13890	0.85	-0.1
3,097,044	-		ABZR86_RS13890	0.85	+0.1
3,097,044	-		ABZR86_RS13890	0.85	-0.2
3,097,205	+				-0.8
3,097,205	+				-0.5
3,097,205	+				-0.3
3,097,205	+				-0.2
3,097,205	+				+0.7
3,097,205	+				-0.4
3,097,205	+				-0.2
3,097,205	+				-0.2
3,097,205	+				-0.1
3,097,205	+				-1.0
3,097,205	+				+0.0
3,097,205	+				-0.1
3,097,205	+				-0.2
3,097,205	+				-0.2
3,097,205	+				-2.9
3,097,205	+				+4.4
3,097,205	+				-0.3
3,097,205	+				-0.5
3,097,205	+				+0.6
3,097,205	+				-0.6
3,097,205	+				+1.8
3,097,205	+				+1.1
3,097,205	+				-0.6
3,097,205	+				+0.0
3,097,205	+				-0.3
3,097,205	+				-0.6
3,097,206	-				-1.0
3,097,206	-				-1.2
3,097,206	-				-0.3
3,097,206	-				-1.2
3,097,206	-				-0.5
3,097,206	-				+0.2
3,097,206	-				-0.7
3,097,206	-				+0.1
3,097,206	-				+0.3
3,097,206	-				+2.3
3,097,206	-				-0.1
3,097,206	-				-0.1
3,097,206	-				+0.8
3,097,206	-				-0.1
3,097,206	-				+0.4
3,097,206	-				-0.1
3,097,208	+				-0.3
3,097,208	+				-0.3
3,097,208	+				-0.2
3,097,208	+				-1.1
3,097,208	+				-0.1
3,097,208	+				+0.5
3,097,208	+				-0.2
3,097,208	+				+0.1
3,097,208	+				-0.6
3,097,208	+				-0.6
3,097,208	+				+0.2
3,097,208	+				+0.3
3,097,208	+				-0.5
3,097,208	+				-0.7
3,097,209	-				-1.8
3,097,209	-				+0.1
3,097,209	-				+0.0
3,097,209	-				+0.0
3,097,209	-				+0.1
3,097,209	-				-0.3
3,097,209	-				+0.1
3,097,209	-				+0.2
3,097,209	-				+0.4
3,097,209	-				+0.1
3,097,253	+				+0.5
3,097,254	-				+0.1
3,097,254	-				+0.1
3,097,279	-				-0.8
3,097,301	+				-2.2
3,097,301	+				-0.5
3,097,301	+				-0.5
3,097,301	+				-0.5
3,097,301	+				-0.5
3,097,301	+				-0.5
3,097,302	-				-0.6
3,097,373	-				-3.6
3,097,529	-		ABZR86_RS13895	0.11	-2.5
3,097,529	-		ABZR86_RS13895	0.11	-2.3
3,097,573	+		ABZR86_RS13895	0.14	-2.1
3,097,573	+		ABZR86_RS13895	0.14	-1.5
3,097,574	-		ABZR86_RS13895	0.14	-5.3
3,097,574	-		ABZR86_RS13895	0.14	-1.6
3,097,574	-		ABZR86_RS13895	0.14	-4.3
3,097,574	-		ABZR86_RS13895	0.14	-2.5
3,097,574	-		ABZR86_RS13895	0.14	-3.2
3,097,574	-		ABZR86_RS13895	0.14	+1.8
3,097,574	-		ABZR86_RS13895	0.14	-0.7
3,097,651	+		ABZR86_RS13895	0.18	-2.1
3,097,652	-		ABZR86_RS13895	0.18	-2.8
3,097,652	-		ABZR86_RS13895	0.18	-2.2
3,097,694	-		ABZR86_RS13895	0.21	-3.0
3,097,694	-		ABZR86_RS13895	0.21	-1.4
3,097,694	-		ABZR86_RS13895	0.21	-2.4
3,097,732	+		ABZR86_RS13895	0.23	-1.2
3,097,733	-		ABZR86_RS13895	0.23	+0.6
3,097,774	+		ABZR86_RS13895	0.26	-3.0
3,097,774	+		ABZR86_RS13895	0.26	+0.6
3,097,774	+		ABZR86_RS13895	0.26	-1.2
3,097,774	+		ABZR86_RS13895	0.26	-3.9
3,097,774	+		ABZR86_RS13895	0.26	-2.4
3,097,774	+		ABZR86_RS13895	0.26	-2.5
3,097,774	+		ABZR86_RS13895	0.26	-3.9
3,097,775	-		ABZR86_RS13895	0.26	-2.9
3,097,775	-		ABZR86_RS13895	0.26	-2.5
3,097,815	+		ABZR86_RS13895	0.28	-1.9
3,097,815	+		ABZR86_RS13895	0.28	-0.4
3,097,815	+		ABZR86_RS13895	0.28	-2.2
3,097,815	+		ABZR86_RS13895	0.28	-2.5
3,097,816	-		ABZR86_RS13895	0.28	-1.6
3,097,816	-		ABZR86_RS13895	0.28	-2.9
3,097,816	-		ABZR86_RS13895	0.28	-1.8
3,097,816	-		ABZR86_RS13895	0.28	-3.3
3,097,816	-		ABZR86_RS13895	0.28	-1.8
3,097,872	-		ABZR86_RS13895	0.31	-2.8
3,097,918	+		ABZR86_RS13895	0.34	-2.2
3,097,918	+		ABZR86_RS13895	0.34	-3.0
3,097,919	-		ABZR86_RS13895	0.34	-3.5
3,097,919	-		ABZR86_RS13895	0.34	-2.2
3,097,919	-		ABZR86_RS13895	0.34	-2.0
3,097,919	-		ABZR86_RS13895	0.34	-2.8
3,097,919	-		ABZR86_RS13895	0.34	-3.7
3,097,919	-		ABZR86_RS13895	0.34	-3.7
3,098,161	+		ABZR86_RS13895	0.48	-3.1
3,098,161	+		ABZR86_RS13895	0.48	-2.8
3,098,161	+		ABZR86_RS13895	0.48	-1.5
3,098,162	-		ABZR86_RS13895	0.48	-3.2
3,098,162	-		ABZR86_RS13895	0.48	-2.5
3,098,164	+		ABZR86_RS13895	0.48	-2.0
3,098,164	+		ABZR86_RS13895	0.48	-3.2
3,098,164	+		ABZR86_RS13895	0.48	+0.3
3,098,164	+		ABZR86_RS13895	0.48	-4.6
3,098,164	+		ABZR86_RS13895	0.48	-2.6
3,098,164	+		ABZR86_RS13895	0.48	-1.6
3,098,164	+		ABZR86_RS13895	0.48	-2.9
3,098,164	+		ABZR86_RS13895	0.48	-3.7
3,098,164	+		ABZR86_RS13895	0.48	-4.8
3,098,165	-		ABZR86_RS13895	0.48	-2.8
3,098,165	-		ABZR86_RS13895	0.48	-0.7
3,098,165	-		ABZR86_RS13895	0.48	-3.3
3,098,209	+		ABZR86_RS13895	0.51	-2.4
3,098,210	-		ABZR86_RS13895	0.51	-2.2
3,098,210	-		ABZR86_RS13895	0.51	-3.8
3,098,335	+		ABZR86_RS13895	0.58	-2.4
3,098,335	+		ABZR86_RS13895	0.58	-2.5
3,098,335	+		ABZR86_RS13895	0.58	-1.6
3,098,335	+		ABZR86_RS13895	0.58	-1.7
3,098,336	-		ABZR86_RS13895	0.58	-1.2
3,098,336	-		ABZR86_RS13895	0.58	-1.4
3,098,336	-		ABZR86_RS13895	0.58	-2.9
3,098,336	-		ABZR86_RS13895	0.58	-2.0
3,098,678	-		ABZR86_RS13895	0.78	-3.4
3,098,846	-		ABZR86_RS13895	0.88	-2.4
3,098,846	-		ABZR86_RS13895	0.88	-2.2
3,098,846	-		ABZR86_RS13895	0.88	-0.9
3,098,846	-		ABZR86_RS13895	0.88	-2.4
3,098,846	-		ABZR86_RS13895	0.88	-2.0
3,098,846	-		ABZR86_RS13895	0.88	-2.3
3,099,281	+		ABZR86_RS13900	0.22	+0.5
3,099,758	+		ABZR86_RS13900	0.69	-0.6
3,099,758	+		ABZR86_RS13900	0.69	-0.0
3,099,902	+		ABZR86_RS13900	0.84	-0.0
3,099,903	-		ABZR86_RS13900	0.84	-1.0
3,099,903	-		ABZR86_RS13900	0.84	-1.3