Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13370

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
2,998,964	+		ABZR86_RS13360	0.85	-0.1
2,998,964	+		ABZR86_RS13360	0.85	-0.4
2,998,964	+		ABZR86_RS13360	0.85	-0.5
2,998,964	+		ABZR86_RS13360	0.85	+1.1
2,998,964	+		ABZR86_RS13360	0.85	-0.1
2,998,965	-		ABZR86_RS13360	0.85	+0.1
2,998,965	-		ABZR86_RS13360	0.85	+0.5
2,998,965	-		ABZR86_RS13360	0.85	-0.2
2,998,965	-		ABZR86_RS13360	0.85	-0.1
2,999,213	+				-1.5
2,999,213	+				-0.6
2,999,213	+				-0.3
2,999,214	-				-0.1
2,999,214	-				-1.1
2,999,214	-				-0.1
2,999,216	+				-0.2
2,999,216	+				-0.5
2,999,278	+				+0.0
2,999,278	+				+0.2
2,999,278	+				+0.3
2,999,278	+				+4.9
2,999,279	-				+0.3
2,999,279	-				-0.0
2,999,279	-				-0.4
2,999,365	+				+0.4
2,999,365	+				-0.2
2,999,366	-				-0.7
2,999,366	-				-0.1
2,999,408	+				+0.8
2,999,468	-		ABZR86_RS13365	0.23	-0.4
2,999,468	-		ABZR86_RS13365	0.23	-0.4
2,999,468	-		ABZR86_RS13365	0.23	-0.1
2,999,468	-		ABZR86_RS13365	0.23	+0.6
2,999,468	-		ABZR86_RS13365	0.23	+0.4
2,999,584	+		ABZR86_RS13365	0.49	-0.1
2,999,584	+		ABZR86_RS13365	0.49	-0.2
2,999,584	+		ABZR86_RS13365	0.49	-0.3
2,999,584	+		ABZR86_RS13365	0.49	-1.1
2,999,585	-		ABZR86_RS13365	0.49	+0.1
2,999,585	-		ABZR86_RS13365	0.49	-0.4
2,999,585	-		ABZR86_RS13365	0.49	-1.0
2,999,585	-		ABZR86_RS13365	0.49	+0.2
2,999,585	-		ABZR86_RS13365	0.49	-0.6
2,999,585	-		ABZR86_RS13365	0.49	-0.8
2,999,585	-		ABZR86_RS13365	0.49	+0.4
2,999,585	-		ABZR86_RS13365	0.49	-0.3
2,999,617	+		ABZR86_RS13365	0.56	-0.5
2,999,617	+		ABZR86_RS13365	0.56	+0.2
2,999,617	+		ABZR86_RS13365	0.56	-0.9
2,999,617	+		ABZR86_RS13365	0.56	+0.6
2,999,618	-		ABZR86_RS13365	0.56	-0.5
2,999,681	-		ABZR86_RS13365	0.70	+0.1
2,999,743	+		ABZR86_RS13365	0.84	-0.7
2,999,759	+		ABZR86_RS13365	0.87	+0.5
2,999,877	+				-0.4
3,000,093	+		ABZR86_RS13370	0.36	-0.4
3,000,094	-		ABZR86_RS13370	0.36	-1.0
3,000,094	-		ABZR86_RS13370	0.36	-1.1
3,000,177	+		ABZR86_RS13370	0.47	-0.9
3,000,178	-		ABZR86_RS13370	0.47	-1.7
3,000,198	+		ABZR86_RS13370	0.50	+1.0
3,000,199	-		ABZR86_RS13370	0.50	-1.5
3,000,199	-		ABZR86_RS13370	0.50	-1.0
3,000,255	+		ABZR86_RS13370	0.57	-0.9
3,000,255	+		ABZR86_RS13370	0.57	-1.9
3,000,255	+		ABZR86_RS13370	0.57	+0.1
3,000,255	+		ABZR86_RS13370	0.57	-1.2
3,000,255	+		ABZR86_RS13370	0.57	-0.7
3,000,255	+		ABZR86_RS13370	0.57	-0.1
3,000,256	-		ABZR86_RS13370	0.57	-1.0
3,000,256	-		ABZR86_RS13370	0.57	+0.7
3,000,288	+		ABZR86_RS13370	0.62	+0.6
3,000,288	+		ABZR86_RS13370	0.62	+0.2
3,000,288	+		ABZR86_RS13370	0.62	-1.6
3,000,289	-		ABZR86_RS13370	0.62	-0.4
3,000,289	-		ABZR86_RS13370	0.62	-1.3
3,000,325	-		ABZR86_RS13370	0.66	-0.1
3,000,325	-		ABZR86_RS13370	0.66	-1.0
3,000,325	-		ABZR86_RS13370	0.66	-3.1
3,000,325	-		ABZR86_RS13370	0.66	-1.9
3,000,325	-		ABZR86_RS13370	0.66	-2.3
3,000,429	+		ABZR86_RS13370	0.80	-1.1
3,000,985	+				-1.1
3,000,986	-				+0.1
3,000,986	-				-0.3
3,000,986	-				-0.0
3,000,986	-				+0.2
3,001,148	+		ABZR86_RS13380	0.69	-0.9
3,001,199	+				-0.6
3,001,300	+				-0.3
3,001,300	+				+0.7
3,001,301	-				+0.8
3,001,301	-				+0.0
3,001,301	-				+0.5
3,001,301	-				-1.1
3,001,301	-				+0.3
3,001,393	+		ABZR86_RS13385	0.15	+0.1
3,001,393	+		ABZR86_RS13385	0.15	-1.9
3,001,394	-		ABZR86_RS13385	0.16	-0.3
3,001,414	+		ABZR86_RS13385	0.18	+0.1
3,001,414	+		ABZR86_RS13385	0.18	-1.0
3,001,415	-		ABZR86_RS13385	0.19	-0.2
3,001,415	-		ABZR86_RS13385	0.19	+0.7
3,001,415	-		ABZR86_RS13385	0.19	-1.6
3,001,415	-		ABZR86_RS13385	0.19	-1.0
3,001,415	-		ABZR86_RS13385	0.19	-0.1
3,001,415	-		ABZR86_RS13385	0.19	+0.3
3,001,477	+		ABZR86_RS13385	0.28	+0.8
3,001,478	-		ABZR86_RS13385	0.28	+0.2
3,001,478	-		ABZR86_RS13385	0.28	-0.5
3,001,483	+		ABZR86_RS13385	0.29	-0.2
3,001,483	+		ABZR86_RS13385	0.29	+0.3
3,001,483	+		ABZR86_RS13385	0.29	-0.3
3,001,483	+		ABZR86_RS13385	0.29	+0.5
3,001,483	+		ABZR86_RS13385	0.29	+0.8
3,001,483	+		ABZR86_RS13385	0.29	+0.0
3,001,483	+		ABZR86_RS13385	0.29	-1.0
3,001,484	-		ABZR86_RS13385	0.29	-0.6
3,001,484	-		ABZR86_RS13385	0.29	-0.4
3,001,484	-		ABZR86_RS13385	0.29	-0.7
3,001,484	-		ABZR86_RS13385	0.29	-0.6
3,001,484	-		ABZR86_RS13385	0.29	+0.5
3,001,484	-		ABZR86_RS13385	0.29	+0.5
3,001,484	-		ABZR86_RS13385	0.29	+0.2
3,001,484	-		ABZR86_RS13385	0.29	+0.2
3,001,484	-		ABZR86_RS13385	0.29	-1.2
3,001,484	-		ABZR86_RS13385	0.29	+0.1
3,001,484	-		ABZR86_RS13385	0.29	-0.4