Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12525

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
2,801,028	+		ABZR86_RS12520	0.62	-0.3
2,801,028	+		ABZR86_RS12520	0.62	-0.1
2,801,029	-		ABZR86_RS12520	0.62	+0.5
2,801,056	-		ABZR86_RS12520	0.63	-0.5
2,801,056	-		ABZR86_RS12520	0.63	+0.3
2,801,100	+		ABZR86_RS12520	0.66	+1.3
2,801,100	+		ABZR86_RS12520	0.66	+0.1
2,801,100	+		ABZR86_RS12520	0.66	+0.2
2,801,100	+		ABZR86_RS12520	0.66	+0.8
2,801,100	+		ABZR86_RS12520	0.66	+0.2
2,801,100	+		ABZR86_RS12520	0.66	+0.5
2,801,100	+		ABZR86_RS12520	0.66	-0.2
2,801,100	+		ABZR86_RS12520	0.66	+0.1
2,801,100	+		ABZR86_RS12520	0.66	+0.3
2,801,100	+		ABZR86_RS12520	0.66	+1.0
2,801,101	-		ABZR86_RS12520	0.66	-0.3
2,801,101	-		ABZR86_RS12520	0.66	-0.8
2,801,101	-		ABZR86_RS12520	0.66	+0.0
2,801,101	-		ABZR86_RS12520	0.66	+0.6
2,801,101	-		ABZR86_RS12520	0.66	+0.4
2,801,178	+		ABZR86_RS12520	0.70	-0.0
2,801,178	+		ABZR86_RS12520	0.70	+0.8
2,801,179	-		ABZR86_RS12520	0.70	+0.4
2,801,179	-		ABZR86_RS12520	0.70	+0.7
2,801,191	-		ABZR86_RS12520	0.70	-0.2
2,801,191	-		ABZR86_RS12520	0.70	+1.5
2,801,191	-		ABZR86_RS12520	0.70	+1.0
2,801,191	-		ABZR86_RS12520	0.70	+0.4
2,801,191	-		ABZR86_RS12520	0.70	+0.4
2,801,262	+		ABZR86_RS12520	0.74	+0.5
2,801,262	+		ABZR86_RS12520	0.74	+1.5
2,801,262	+		ABZR86_RS12520	0.74	+0.7
2,801,263	-		ABZR86_RS12520	0.74	+0.6
2,801,263	-		ABZR86_RS12520	0.74	-0.9
2,801,263	-		ABZR86_RS12520	0.74	-0.2
2,801,265	+		ABZR86_RS12520	0.74	+0.5
2,801,265	+		ABZR86_RS12520	0.74	+0.1
2,801,266	-		ABZR86_RS12520	0.75	-0.3
2,801,266	-		ABZR86_RS12520	0.75	-0.1
2,801,266	-		ABZR86_RS12520	0.75	+0.1
2,801,266	-		ABZR86_RS12520	0.75	+0.6
2,801,266	-		ABZR86_RS12520	0.75	-0.7
2,801,744	+				+0.2
2,801,744	+				+0.6
2,801,744	+				-1.0
2,801,744	+				+0.1
2,801,744	+				-0.8
2,801,744	+				+0.2
2,801,745	-				+0.3
2,801,745	-				+0.1
2,801,745	-				-0.2
2,801,748	+				+0.3
2,801,748	+				-1.0
2,801,748	+				-0.8
2,801,748	+				+0.2
2,801,748	+				-0.8
2,801,749	-				-0.2
2,801,749	-				+0.1
2,801,749	-				+0.2
2,801,774	-				-0.4
2,801,788	+				+0.6
2,801,976	-		ABZR86_RS12525	0.13	-0.9
2,802,128	+		ABZR86_RS12525	0.24	-0.5
2,802,128	+		ABZR86_RS12525	0.24	-0.9
2,802,128	+		ABZR86_RS12525	0.24	-0.1
2,802,129	-		ABZR86_RS12525	0.24	-0.4
2,802,221	+		ABZR86_RS12525	0.31	+0.5
2,802,222	-		ABZR86_RS12525	0.31	-0.4
2,802,222	-		ABZR86_RS12525	0.31	-0.6
2,802,222	-		ABZR86_RS12525	0.31	-0.3
2,802,506	+		ABZR86_RS12525	0.51	-0.2
2,802,506	+		ABZR86_RS12525	0.51	+0.2
2,802,506	+		ABZR86_RS12525	0.51	-0.0
2,802,506	+		ABZR86_RS12525	0.51	-0.5
2,802,506	+		ABZR86_RS12525	0.51	-0.5
2,802,527	+		ABZR86_RS12525	0.53	-0.4
2,802,527	+		ABZR86_RS12525	0.53	-0.5
2,802,528	-		ABZR86_RS12525	0.53	-0.2
2,802,528	-		ABZR86_RS12525	0.53	-0.7
2,802,528	-		ABZR86_RS12525	0.53	+0.2
2,802,528	-		ABZR86_RS12525	0.53	-0.8
2,802,528	-		ABZR86_RS12525	0.53	+0.8
2,802,632	+		ABZR86_RS12525	0.61	-0.5
2,802,632	+		ABZR86_RS12525	0.61	-0.3
2,802,632	+		ABZR86_RS12525	0.61	-0.1
2,802,633	-		ABZR86_RS12525	0.61	-1.7
2,802,633	-		ABZR86_RS12525	0.61	-0.4
2,802,728	+		ABZR86_RS12525	0.68	+0.2
2,802,728	+		ABZR86_RS12525	0.68	+0.4
2,802,728	+		ABZR86_RS12525	0.68	+0.6
2,802,728	+		ABZR86_RS12525	0.68	+0.1
2,802,729	-		ABZR86_RS12525	0.68	+0.4
2,803,040	+				-1.8
2,803,040	+				-0.2
2,803,176	+				-0.7
2,803,176	+				-0.5
2,803,176	+				-0.2
2,803,177	-				+0.9
2,803,177	-				+0.6
2,803,177	-				+1.3
2,803,177	-				-0.6
2,803,203	+				+0.1
2,803,203	+				+0.2
2,803,204	-				-0.8
2,803,204	-				-0.2
2,803,204	-				-0.1
2,803,204	-				+1.1
2,803,204	-				-1.3
2,803,257	+				-0.2
2,803,257	+				+0.0
2,803,257	+				+0.2
2,803,257	+				-0.2
2,803,257	+				-1.0
2,803,257	+				-1.0
2,803,257	+				-0.2
2,803,257	+				+0.3
2,803,257	+				-0.0
2,803,257	+				-0.9
2,803,257	+				+0.1
2,803,258	-				-0.2
2,803,258	-				+1.3
2,803,258	-				-1.2
2,803,258	-				-0.4
2,803,258	-				-0.2
2,803,258	-				-1.5
2,803,258	-				-0.2
2,803,258	-				-1.2
2,803,258	-				-0.4
2,803,319	-				-0.1
2,803,395	+				+7.1
2,803,410	+				+0.1
2,803,410	+				-0.1
2,803,410	+				-0.3
2,803,410	+				-1.2
2,803,411	-				+0.2
2,803,411	-				+1.2
2,803,411	-				-0.7
2,803,472	+				+2.1
2,803,473	-				-0.6
2,803,473	-				-0.5
2,803,473	-				-0.2
2,803,521	-				+0.2
2,803,673	+		ABZR86_RS12530	0.18	+0.1
2,803,674	-		ABZR86_RS12530	0.18	-0.6
2,803,674	-		ABZR86_RS12530	0.18	-0.2
2,803,674	-		ABZR86_RS12530	0.18	+0.2
2,803,697	+		ABZR86_RS12530	0.20	-1.1
2,803,697	+		ABZR86_RS12530	0.20	+0.4
2,803,697	+		ABZR86_RS12530	0.20	-0.5
2,803,698	-		ABZR86_RS12530	0.20	+0.4
2,803,698	-		ABZR86_RS12530	0.20	-0.3
2,803,698	-		ABZR86_RS12530	0.20	+0.1
2,803,698	-		ABZR86_RS12530	0.20	-0.1
2,803,751	-		ABZR86_RS12530	0.24	-0.1
2,803,751	-		ABZR86_RS12530	0.24	+2.2
2,803,751	-		ABZR86_RS12530	0.24	-0.4
2,803,751	-		ABZR86_RS12530	0.24	+0.5
2,803,756	+		ABZR86_RS12530	0.25	-0.1
2,803,756	+		ABZR86_RS12530	0.25	-0.2
2,803,757	-		ABZR86_RS12530	0.25	-0.0
2,803,840	+		ABZR86_RS12530	0.31	+0.5
2,803,841	-		ABZR86_RS12530	0.32	-0.3