Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12505

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
2,796,854	+		ABZR86_RS12495	0.81	-0.4
2,796,854	+		ABZR86_RS12495	0.81	+0.2
2,796,855	-		ABZR86_RS12495	0.81	+0.2
2,796,855	-		ABZR86_RS12495	0.81	+0.5
2,796,855	-		ABZR86_RS12495	0.81	-0.6
2,797,056	+				+0.2
2,797,056	+				-0.2
2,797,057	-				-0.5
2,797,057	-				+0.5
2,797,136	-		ABZR86_RS12500	0.11	-0.2
2,797,136	-		ABZR86_RS12500	0.11	+0.3
2,797,339	+		ABZR86_RS12500	0.43	-0.4
2,797,339	+		ABZR86_RS12500	0.43	+0.2
2,797,339	+		ABZR86_RS12500	0.43	-0.1
2,797,339	+		ABZR86_RS12500	0.43	+0.2
2,797,339	+		ABZR86_RS12500	0.43	+0.1
2,797,340	-		ABZR86_RS12500	0.43	+0.5
2,797,372	+		ABZR86_RS12500	0.48	+0.7
2,797,372	+		ABZR86_RS12500	0.48	-0.0
2,797,372	+		ABZR86_RS12500	0.48	+0.3
2,797,373	-		ABZR86_RS12500	0.48	-1.4
2,797,373	-		ABZR86_RS12500	0.48	-0.5
2,797,373	-		ABZR86_RS12500	0.48	-1.2
2,797,373	-		ABZR86_RS12500	0.48	-0.3
2,797,402	+		ABZR86_RS12500	0.53	-0.1
2,797,403	-		ABZR86_RS12500	0.53	-0.3
2,797,403	-		ABZR86_RS12500	0.53	+0.3
2,797,469	+		ABZR86_RS12500	0.63	+1.6
2,797,470	-		ABZR86_RS12500	0.64	-0.6
2,797,525	+		ABZR86_RS12500	0.72	-0.5
2,797,525	+		ABZR86_RS12500	0.72	-0.1
2,797,525	+		ABZR86_RS12500	0.72	+0.3
2,797,525	+		ABZR86_RS12500	0.72	+0.9
2,797,525	+		ABZR86_RS12500	0.72	+0.7
2,797,525	+		ABZR86_RS12500	0.72	+0.6
2,797,525	+		ABZR86_RS12500	0.72	+0.3
2,797,525	+		ABZR86_RS12500	0.72	-1.3
2,797,526	-		ABZR86_RS12500	0.73	-1.9
2,797,526	-		ABZR86_RS12500	0.73	-1.3
2,797,526	-		ABZR86_RS12500	0.73	+0.2
2,797,526	-		ABZR86_RS12500	0.73	-0.7
2,797,526	-		ABZR86_RS12500	0.73	-0.7
2,797,526	-		ABZR86_RS12500	0.73	+0.4
2,797,526	-		ABZR86_RS12500	0.73	-0.3
2,797,526	-		ABZR86_RS12500	0.73	-0.4
2,797,526	-		ABZR86_RS12500	0.73	-0.1
2,797,526	-		ABZR86_RS12500	0.73	+0.4
2,797,526	-		ABZR86_RS12500	0.73	-0.4
2,797,526	-		ABZR86_RS12500	0.73	-0.2
2,797,526	-		ABZR86_RS12500	0.73	+0.3
2,797,594	+		ABZR86_RS12500	0.83	+0.7
2,797,711	-				-1.2
2,797,711	-				-0.2
2,797,711	-				-0.8
2,797,711	-				-0.0
2,797,793	+				-0.6
2,797,801	+				-0.6
2,797,840	+				+0.7
2,797,840	+				-1.0
2,797,840	+				-0.4
2,797,841	-				-0.7
2,797,885	+				+0.2
2,797,885	+				-0.3
2,797,885	+				-0.3
2,797,885	+				-2.0
2,797,885	+				-0.9
2,797,886	-				-0.9
2,797,886	-				-1.8
2,797,886	-				-3.0
2,797,984	+		ABZR86_RS12505	0.20	+0.2
2,798,029	+		ABZR86_RS12505	0.25	-1.1
2,798,029	+		ABZR86_RS12505	0.25	-1.4
2,798,030	-		ABZR86_RS12505	0.26	+0.2
2,798,125	+		ABZR86_RS12505	0.38	+0.6
2,798,125	+		ABZR86_RS12505	0.38	-1.8
2,798,169	+		ABZR86_RS12505	0.43	-1.3
2,798,170	-		ABZR86_RS12505	0.43	-1.7
2,798,170	-		ABZR86_RS12505	0.43	+0.1
2,798,170	-		ABZR86_RS12505	0.43	-1.2
2,798,270	-		ABZR86_RS12505	0.56	-1.0
2,798,284	+		ABZR86_RS12505	0.58	-1.4
2,798,285	-		ABZR86_RS12505	0.58	-0.6
2,798,285	-		ABZR86_RS12505	0.58	-1.1
2,798,307	-		ABZR86_RS12505	0.61	-1.4
2,798,573	+				-0.9
2,798,624	+				-0.6
2,798,624	+				-0.1
2,798,625	-				+0.2
2,798,625	-				-1.1
2,798,984	+				+0.9
2,799,268	+		ABZR86_RS12515	0.39	-1.2
2,799,268	+		ABZR86_RS12515	0.39	+0.5
2,799,268	+		ABZR86_RS12515	0.39	-0.1
2,799,269	-		ABZR86_RS12515	0.39	+0.6
2,799,269	-		ABZR86_RS12515	0.39	+0.9
2,799,269	-		ABZR86_RS12515	0.39	-0.3
2,799,269	-		ABZR86_RS12515	0.39	-0.5
2,799,269	-		ABZR86_RS12515	0.39	+0.4
2,799,294	-		ABZR86_RS12515	0.42	-0.2
2,799,294	-		ABZR86_RS12515	0.42	-0.7