Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS11860

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
2,660,562	-				+0.2
2,660,562	-				-1.4
2,660,562	-				-2.7
2,661,065	-				-0.8
2,661,065	-				+0.1
2,661,067	-				-0.8
2,661,067	-				-0.3
2,661,080	-				+0.4
2,661,080	-				+0.2
2,661,117	+				-0.5
2,661,117	+				+0.4
2,661,117	+				+0.0
2,661,117	+				+0.4
2,661,117	+				+0.3
2,661,117	+				-0.9
2,661,117	+				+0.2
2,661,117	+				-0.6
2,661,118	-				+0.1
2,661,118	-				-0.9
2,661,118	-				+0.0
2,661,118	-				-1.2
2,661,118	-				+0.4
2,661,118	-				-1.2
2,661,172	+				+0.1
2,661,173	-				-0.9
2,661,173	-				-1.3
2,661,179	+				-1.1
2,661,182	-				-1.7
2,661,201	+				-0.9
2,661,201	+				+0.6
2,661,201	+				+0.6
2,661,202	-				-1.7
2,661,285	+				-0.5
2,661,286	-				-1.2
2,661,286	-				-0.9
2,661,374	+		ABZR86_RS11860	0.15	-1.8
2,661,374	+		ABZR86_RS11860	0.15	-0.8
2,661,478	+		ABZR86_RS11860	0.27	-0.5
2,661,479	-		ABZR86_RS11860	0.27	+1.0
2,661,484	+		ABZR86_RS11860	0.28	-0.1
2,661,574	+		ABZR86_RS11860	0.39	-0.7
2,661,575	-		ABZR86_RS11860	0.39	+0.3
2,661,575	-		ABZR86_RS11860	0.39	-1.2
2,661,749	+		ABZR86_RS11860	0.59	-0.5
2,661,749	+		ABZR86_RS11860	0.59	-0.4
2,661,749	+		ABZR86_RS11860	0.59	-1.4
2,661,750	-		ABZR86_RS11860	0.59	-0.9
2,661,750	-		ABZR86_RS11860	0.59	-0.8
2,661,750	-		ABZR86_RS11860	0.59	-0.4
2,661,771	-		ABZR86_RS11860	0.62	-2.0
2,661,771	-		ABZR86_RS11860	0.62	-0.3
2,661,771	-		ABZR86_RS11860	0.62	-1.3
2,661,806	+		ABZR86_RS11860	0.66	-2.7
2,661,806	+		ABZR86_RS11860	0.66	-2.5
2,661,807	-		ABZR86_RS11860	0.66	-0.6
2,661,809	+		ABZR86_RS11860	0.66	-1.0
2,661,809	+		ABZR86_RS11860	0.66	-1.2
2,661,809	+		ABZR86_RS11860	0.66	-1.1
2,661,809	+		ABZR86_RS11860	0.66	+0.1
2,661,809	+		ABZR86_RS11860	0.66	-1.9
2,661,809	+		ABZR86_RS11860	0.66	-2.1
2,661,810	-		ABZR86_RS11860	0.66	-1.6
2,661,810	-		ABZR86_RS11860	0.66	-0.3
2,661,810	-		ABZR86_RS11860	0.66	-0.9
2,661,810	-		ABZR86_RS11860	0.66	-1.5
2,661,810	-		ABZR86_RS11860	0.66	-2.1
2,661,810	-		ABZR86_RS11860	0.66	-1.4
2,661,810	-		ABZR86_RS11860	0.66	-1.0
2,661,827	+		ABZR86_RS11860	0.68	-1.3
2,661,828	-		ABZR86_RS11860	0.69	-1.1
2,661,885	-		ABZR86_RS11860	0.75	-0.7
2,661,885	-		ABZR86_RS11860	0.75	-1.5
2,661,893	+		ABZR86_RS11860	0.76	-1.5
2,661,894	-		ABZR86_RS11860	0.76	-1.6
2,661,894	-		ABZR86_RS11860	0.76	-1.6
2,661,894	-		ABZR86_RS11860	0.76	-0.8
2,661,894	-		ABZR86_RS11860	0.76	-0.7
2,661,932	+		ABZR86_RS11860	0.81	-0.4
2,661,933	-		ABZR86_RS11860	0.81	-3.1
2,661,941	+		ABZR86_RS11860	0.82	-1.7
2,662,097	-				+0.4
2,662,097	-				-1.7
2,662,566	-		ABZR86_RS11870	0.18	-2.8
2,662,566	-		ABZR86_RS11870	0.18	-3.0
2,662,577	+		ABZR86_RS11870	0.19	-5.5
2,662,577	+		ABZR86_RS11870	0.19	-2.7
2,662,577	+		ABZR86_RS11870	0.19	-4.0
2,662,577	+		ABZR86_RS11870	0.19	-2.9
2,662,578	-		ABZR86_RS11870	0.20	-0.2
2,662,578	-		ABZR86_RS11870	0.20	-1.5
2,662,578	-		ABZR86_RS11870	0.20	-2.1
2,662,578	-		ABZR86_RS11870	0.20	-3.1
2,662,604	+		ABZR86_RS11870	0.23	-4.5
2,662,604	+		ABZR86_RS11870	0.23	-2.8
2,662,604	+		ABZR86_RS11870	0.23	-3.0
2,662,605	-		ABZR86_RS11870	0.24	-2.9
2,662,605	-		ABZR86_RS11870	0.24	-2.7
2,662,605	-		ABZR86_RS11870	0.24	-2.9
2,662,605	-		ABZR86_RS11870	0.24	-1.9
2,662,605	-		ABZR86_RS11870	0.24	-2.8
2,662,644	-		ABZR86_RS11870	0.29	-4.2
2,662,644	-		ABZR86_RS11870	0.29	-4.8
2,662,644	-		ABZR86_RS11870	0.29	-4.4
2,662,754	+		ABZR86_RS11870	0.46	-4.2
2,662,755	-		ABZR86_RS11870	0.46	-3.9
2,662,797	-		ABZR86_RS11870	0.52	-3.0
2,662,874	+		ABZR86_RS11870	0.64	-5.1
2,662,933	-		ABZR86_RS11870	0.73	-3.1
2,662,965	+		ABZR86_RS11870	0.77	-2.9