Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS11120

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
2,478,186	-		ABZR86_RS11110	0.88	+0.7
2,478,209	-				+0.1
2,478,209	-				-1.4
2,478,209	-				-0.5
2,478,227	+				+1.4
2,478,227	+				+1.2
2,478,228	-				-1.3
2,478,263	+				-0.2
2,478,333	+				-0.3
2,478,333	+				-0.2
2,478,334	-				+0.2
2,478,367	-				+0.0
2,478,423	+		ABZR86_RS11115	0.13	+0.5
2,478,427	+		ABZR86_RS11115	0.14	-0.3
2,478,427	+		ABZR86_RS11115	0.14	+0.8
2,478,427	+		ABZR86_RS11115	0.14	+0.0
2,478,479	+		ABZR86_RS11115	0.25	-2.3
2,478,480	-		ABZR86_RS11115	0.25	-0.1
2,478,498	+		ABZR86_RS11115	0.29	-0.7
2,478,498	+		ABZR86_RS11115	0.29	+0.3
2,478,498	+		ABZR86_RS11115	0.29	+1.5
2,478,499	-		ABZR86_RS11115	0.29	-0.9
2,478,665	-		ABZR86_RS11115	0.65	+0.7
2,478,665	-		ABZR86_RS11115	0.65	+0.1
2,478,675	+		ABZR86_RS11115	0.68	-0.7
2,478,675	+		ABZR86_RS11115	0.68	+0.7
2,478,753	+		ABZR86_RS11115	0.85	-0.2
2,478,753	+		ABZR86_RS11115	0.85	+0.4
2,478,753	+		ABZR86_RS11115	0.85	+0.4
2,478,753	+		ABZR86_RS11115	0.85	-0.9
2,478,804	+				+0.2
2,478,824	-				-0.1
2,478,824	-				-0.2
2,478,824	-				-0.3
2,478,863	+				-0.4
2,478,863	+				-0.8
2,479,043	+				-0.7
2,479,049	+				-0.3
2,479,049	+				+0.7
2,479,050	-				-1.2
2,479,050	-				-0.8
2,479,051	+				+0.7
2,479,052	-				+0.5
2,479,052	-				-0.5
2,479,091	-				-0.2
2,479,167	+				+0.9
2,479,168	-				+0.7
2,479,168	-				-1.2
2,479,168	-				+0.0
2,479,209	+				-0.3
2,479,483	+		ABZR86_RS11120	0.22	+0.4
2,479,483	+		ABZR86_RS11120	0.22	-0.6
2,479,484	-		ABZR86_RS11120	0.22	+0.3
2,479,815	-		ABZR86_RS11120	0.45	+0.0
2,480,093	-		ABZR86_RS11120	0.64	+0.5
2,480,164	+		ABZR86_RS11120	0.69	+1.5
2,480,165	-		ABZR86_RS11120	0.69	-0.2
2,480,188	+		ABZR86_RS11120	0.71	-0.1
2,480,189	-		ABZR86_RS11120	0.71	+0.9
2,480,198	-		ABZR86_RS11120	0.71	+1.5
2,480,198	-		ABZR86_RS11120	0.71	+1.8
2,480,202	-		ABZR86_RS11120	0.72	-0.8
2,480,202	-		ABZR86_RS11120	0.72	+0.8
2,480,504	-				+0.6
2,480,649	+				-0.3
2,480,661	+				+0.4
2,480,677	-				+0.3
2,481,294	+		ABZR86_RS11125	0.22	+0.8
2,481,307	-		ABZR86_RS11125	0.22	-1.3