Experiment: Nalidixic 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10675 and ABZR86_RS10680 are separated by 178 nucleotides ABZR86_RS10680 and ABZR86_RS10685 are separated by 408 nucleotides
ABZR86_RS10675: ABZR86_RS10675 - bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II, at 2,371,672 to 2,372,763
_RS10675
ABZR86_RS10680: ABZR86_RS10680 - riboflavin synthase, at 2,372,942 to 2,373,586
_RS10680
ABZR86_RS10685: ABZR86_RS10685 - LysR family transcriptional regulator, at 2,373,995 to 2,374,897
_RS10685
Position (kb)
2372
2373
2374 Strain fitness (log2 ratio)
-1
0
1 at 2372.786 kb on + strand at 2372.789 kb on + strand at 2373.903 kb on + strand at 2373.941 kb on - strand at 2373.941 kb on - strand at 2373.996 kb on + strand at 2373.996 kb on + strand at 2373.996 kb on + strand at 2373.996 kb on + strand at 2373.996 kb on + strand at 2374.149 kb on + strand, within ABZR86_RS10685 at 2374.149 kb on + strand, within ABZR86_RS10685 at 2374.149 kb on + strand, within ABZR86_RS10685 at 2374.149 kb on + strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.150 kb on - strand, within ABZR86_RS10685 at 2374.363 kb on - strand, within ABZR86_RS10685 at 2374.384 kb on - strand, within ABZR86_RS10685 at 2374.384 kb on - strand, within ABZR86_RS10685 at 2374.384 kb on - strand, within ABZR86_RS10685 at 2374.384 kb on - strand, within ABZR86_RS10685 at 2374.482 kb on + strand, within ABZR86_RS10685 at 2374.482 kb on + strand, within ABZR86_RS10685 at 2374.482 kb on + strand, within ABZR86_RS10685 at 2374.482 kb on + strand, within ABZR86_RS10685 at 2374.483 kb on - strand, within ABZR86_RS10685 at 2374.483 kb on - strand, within ABZR86_RS10685 at 2374.483 kb on - strand, within ABZR86_RS10685 at 2374.495 kb on - strand, within ABZR86_RS10685 at 2374.495 kb on - strand, within ABZR86_RS10685 at 2374.497 kb on - strand, within ABZR86_RS10685 at 2374.569 kb on + strand, within ABZR86_RS10685
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.08 mg/ml remove 2,372,786 + +0.7 2,372,789 + -0.2 2,373,903 + +0.7 2,373,941 - +1.0 2,373,941 - -0.1 2,373,996 + +1.6 2,373,996 + -0.3 2,373,996 + +0.8 2,373,996 + +0.3 2,373,996 + +0.7 2,374,149 + ABZR86_RS10685 0.17 +0.3 2,374,149 + ABZR86_RS10685 0.17 -0.9 2,374,149 + ABZR86_RS10685 0.17 -0.4 2,374,149 + ABZR86_RS10685 0.17 -0.3 2,374,150 - ABZR86_RS10685 0.17 +0.2 2,374,150 - ABZR86_RS10685 0.17 -0.0 2,374,150 - ABZR86_RS10685 0.17 +0.3 2,374,150 - ABZR86_RS10685 0.17 +0.1 2,374,150 - ABZR86_RS10685 0.17 -0.2 2,374,363 - ABZR86_RS10685 0.41 +0.3 2,374,384 - ABZR86_RS10685 0.43 -0.2 2,374,384 - ABZR86_RS10685 0.43 +0.4 2,374,384 - ABZR86_RS10685 0.43 -0.1 2,374,384 - ABZR86_RS10685 0.43 -0.3 2,374,482 + ABZR86_RS10685 0.54 +0.3 2,374,482 + ABZR86_RS10685 0.54 +0.1 2,374,482 + ABZR86_RS10685 0.54 -0.0 2,374,482 + ABZR86_RS10685 0.54 +1.2 2,374,483 - ABZR86_RS10685 0.54 +0.1 2,374,483 - ABZR86_RS10685 0.54 +0.7 2,374,483 - ABZR86_RS10685 0.54 -0.0 2,374,495 - ABZR86_RS10685 0.55 +0.3 2,374,495 - ABZR86_RS10685 0.55 +0.7 2,374,497 - ABZR86_RS10685 0.56 +0.7 2,374,569 + ABZR86_RS10685 0.64 +0.8
Or see this region's nucleotide sequence