Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10135

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
2,250,156	-		ABZR86_RS10125	0.71	-0.1
2,250,647	-		ABZR86_RS10130	0.34	+0.9
2,250,802	+		ABZR86_RS10130	0.68	-0.0
2,250,803	-		ABZR86_RS10130	0.68	+0.3
2,250,832	+		ABZR86_RS10130	0.74	+0.3
2,250,832	+		ABZR86_RS10130	0.74	-0.2
2,250,832	+		ABZR86_RS10130	0.74	-0.1
2,250,832	+		ABZR86_RS10130	0.74	-0.7
2,250,833	-		ABZR86_RS10130	0.74	+1.6
2,250,954	+				+0.7
2,250,955	-				-0.4
2,250,955	-				+0.3
2,250,955	-				-0.4
2,250,955	-				-0.8
2,250,955	-				+0.2
2,250,999	+				-0.3
2,251,000	-				+0.3
2,251,000	-				-0.4
2,251,043	+				+0.4
2,251,044	-				-0.9
2,251,112	+				-0.4
2,251,113	-				-0.7
2,251,337	+		ABZR86_RS10135	0.29	+1.0
2,251,337	+		ABZR86_RS10135	0.29	+0.5
2,251,337	+		ABZR86_RS10135	0.29	-0.6
2,251,338	-		ABZR86_RS10135	0.29	-2.0
2,251,385	+		ABZR86_RS10135	0.34	-0.6
2,251,385	+		ABZR86_RS10135	0.34	-1.1
2,251,385	+		ABZR86_RS10135	0.34	-0.9
2,251,386	-		ABZR86_RS10135	0.34	-0.5
2,251,386	-		ABZR86_RS10135	0.34	+0.1
2,251,386	-		ABZR86_RS10135	0.34	-0.8
2,251,386	-		ABZR86_RS10135	0.34	-0.8
2,251,458	+		ABZR86_RS10135	0.41	-1.6
2,251,607	+		ABZR86_RS10135	0.56	+0.0
2,251,607	+		ABZR86_RS10135	0.56	-0.5
2,251,608	-		ABZR86_RS10135	0.56	-0.8
2,251,696	+		ABZR86_RS10135	0.65	-0.3
2,251,766	+		ABZR86_RS10135	0.72	-1.0
2,251,767	-		ABZR86_RS10135	0.72	-1.7
2,251,916	+		ABZR86_RS10135	0.87	-1.5
2,251,917	-		ABZR86_RS10135	0.87	-1.0
2,252,121	+				+0.1
2,252,121	+				+0.1
2,252,143	-				-1.5
2,252,446	+		ABZR86_RS10140	0.22	-0.7
2,252,446	+		ABZR86_RS10140	0.22	-0.9
2,252,446	+		ABZR86_RS10140	0.22	+0.5
2,252,446	+		ABZR86_RS10140	0.22	-0.2
2,252,447	-		ABZR86_RS10140	0.22	-0.7
2,252,447	-		ABZR86_RS10140	0.22	-0.0
2,252,447	-		ABZR86_RS10140	0.22	-0.7
2,252,447	-		ABZR86_RS10140	0.22	-0.1
2,252,497	-		ABZR86_RS10140	0.26	-1.0
2,252,547	+		ABZR86_RS10140	0.29	+0.8
2,252,677	+		ABZR86_RS10140	0.40	-0.1
2,252,677	+		ABZR86_RS10140	0.40	-0.4
2,252,677	+		ABZR86_RS10140	0.40	-0.3
2,252,677	+		ABZR86_RS10140	0.40	+0.9
2,252,677	+		ABZR86_RS10140	0.40	-0.7
2,252,677	+		ABZR86_RS10140	0.40	-0.1
2,252,677	+		ABZR86_RS10140	0.40	-1.0
2,252,678	-		ABZR86_RS10140	0.40	+0.8
2,252,678	-		ABZR86_RS10140	0.40	-0.8
2,252,969	+		ABZR86_RS10140	0.63	-0.3
2,252,969	+		ABZR86_RS10140	0.63	-0.2
2,252,970	-		ABZR86_RS10140	0.63	-1.9