Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS09885

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
2,193,231	+		ABZR86_RS09875	0.85	+1.1
2,193,231	+		ABZR86_RS09875	0.85	+0.5
2,193,231	+		ABZR86_RS09875	0.85	+2.0
2,193,231	+		ABZR86_RS09875	0.85	+1.1
2,193,231	+		ABZR86_RS09875	0.85	+0.4
2,193,232	-		ABZR86_RS09875	0.85	+1.0
2,193,300	+				+0.5
2,193,300	+				-0.3
2,193,301	-				+0.4
2,193,301	-				+0.1
2,193,301	-				+1.0
2,193,301	-				+0.9
2,193,301	-				+0.3
2,193,301	-				+1.0
2,193,303	+				+0.6
2,193,304	-				+0.5
2,193,330	+				+1.0
2,193,330	+				+0.3
2,193,330	+				+0.5
2,193,331	-				+0.2
2,193,333	+				+0.5
2,193,354	+				+1.0
2,193,354	+				+0.6
2,193,355	-				+0.8
2,193,415	+				+0.3
2,193,416	-				+0.7
2,193,416	-				+0.5
2,193,416	-				+0.4
2,193,522	-		ABZR86_RS09880	0.17	+0.9
2,193,542	+		ABZR86_RS09880	0.20	+0.8
2,193,542	+		ABZR86_RS09880	0.20	+0.4
2,193,543	-		ABZR86_RS09880	0.20	+1.0
2,193,566	+		ABZR86_RS09880	0.24	+0.8
2,193,566	+		ABZR86_RS09880	0.24	+1.1
2,193,704	+		ABZR86_RS09880	0.47	+0.7
2,193,705	-		ABZR86_RS09880	0.47	+0.5
2,193,705	-		ABZR86_RS09880	0.47	+0.5
2,193,833	+		ABZR86_RS09880	0.68	+1.0
2,193,833	+		ABZR86_RS09880	0.68	+0.9
2,193,833	+		ABZR86_RS09880	0.68	+0.6
2,193,834	-		ABZR86_RS09880	0.68	+2.1
2,193,834	-		ABZR86_RS09880	0.68	+0.6
2,193,834	-		ABZR86_RS09880	0.68	+1.3
2,193,834	-		ABZR86_RS09880	0.68	+0.7
2,194,039	+				+0.8
2,194,039	+				+0.5
2,194,039	+				+0.1
2,194,040	-				+0.8
2,194,040	-				-0.3
2,194,043	+				+0.9
2,194,043	+				+0.6
2,194,043	+				+0.7
2,194,043	+				+0.2
2,194,043	+				+0.7
2,194,043	+				+0.6
2,194,044	-				+0.9
2,194,044	-				-0.1
2,194,044	-				+0.8
2,194,044	-				-0.1
2,194,044	-				-0.2
2,194,044	-				+0.2
2,194,044	-				+0.8
2,194,044	-				+0.2
2,194,044	-				+1.6
2,194,044	-				+1.2
2,194,090	+				-1.3
2,194,110	+				+1.0
2,194,110	+				+1.0
2,194,110	+				+0.7
2,194,111	-				+0.4
2,194,111	-				-0.1
2,194,115	+				-0.3
2,194,116	-				-0.1
2,194,452	+		ABZR86_RS09885	0.20	-0.7
2,194,453	-		ABZR86_RS09885	0.21	-0.2
2,194,539	+		ABZR86_RS09885	0.28	+0.8
2,195,169	+		ABZR86_RS09885	0.81	-2.2
2,195,506	+				+0.4
2,195,506	+				+0.2
2,195,507	-				-0.3
2,195,507	-				-0.2
2,195,507	-				+0.3
2,195,542	+		ABZR86_RS09890	0.12	-0.7
2,195,572	+		ABZR86_RS09890	0.15	-0.8
2,195,573	-		ABZR86_RS09890	0.15	-0.3
2,195,573	-		ABZR86_RS09890	0.15	+0.4
2,195,573	-		ABZR86_RS09890	0.15	+0.2
2,195,573	-		ABZR86_RS09890	0.15	-0.3
2,195,573	-		ABZR86_RS09890	0.15	-0.8
2,195,573	-		ABZR86_RS09890	0.15	+0.5
2,195,573	-		ABZR86_RS09890	0.15	-0.6
2,195,573	-		ABZR86_RS09890	0.15	-1.0
2,195,573	-		ABZR86_RS09890	0.15	-0.2
2,195,629	+		ABZR86_RS09890	0.21	+0.2
2,195,630	-		ABZR86_RS09890	0.21	+0.5
2,195,755	+		ABZR86_RS09890	0.33	+0.3
2,195,755	+		ABZR86_RS09890	0.33	+0.8
2,195,755	+		ABZR86_RS09890	0.33	+0.3
2,195,755	+		ABZR86_RS09890	0.33	+0.9
2,195,755	+		ABZR86_RS09890	0.33	-0.2
2,195,755	+		ABZR86_RS09890	0.33	+0.7
2,195,756	-		ABZR86_RS09890	0.33	+0.5
2,195,756	-		ABZR86_RS09890	0.33	+0.5
2,195,756	-		ABZR86_RS09890	0.33	+0.2
2,195,756	-		ABZR86_RS09890	0.33	+1.0
2,195,756	-		ABZR86_RS09890	0.33	+0.1
2,195,756	-		ABZR86_RS09890	0.33	+1.0
2,195,756	-		ABZR86_RS09890	0.33	+0.7
2,195,912	+		ABZR86_RS09890	0.48	+0.5
2,195,912	+		ABZR86_RS09890	0.48	+0.9
2,195,912	+		ABZR86_RS09890	0.48	+0.1
2,195,912	+		ABZR86_RS09890	0.48	+0.2
2,195,912	+		ABZR86_RS09890	0.48	+0.5
2,195,912	+		ABZR86_RS09890	0.48	+0.0
2,195,912	+		ABZR86_RS09890	0.48	+0.5
2,195,913	-		ABZR86_RS09890	0.48	+0.3
2,195,913	-		ABZR86_RS09890	0.48	+0.7
2,195,913	-		ABZR86_RS09890	0.48	+1.4
2,195,914	+		ABZR86_RS09890	0.48	+0.7
2,195,914	+		ABZR86_RS09890	0.48	-0.0
2,195,914	+		ABZR86_RS09890	0.48	-0.0
2,195,914	+		ABZR86_RS09890	0.48	+0.4
2,195,914	+		ABZR86_RS09890	0.48	-0.4
2,195,914	+		ABZR86_RS09890	0.48	+0.4
2,195,914	+		ABZR86_RS09890	0.48	+0.2
2,195,914	+		ABZR86_RS09890	0.48	+0.5
2,195,914	+		ABZR86_RS09890	0.48	-0.0
2,195,915	-		ABZR86_RS09890	0.48	+0.4
2,195,915	-		ABZR86_RS09890	0.48	-0.2
2,195,915	-		ABZR86_RS09890	0.48	+0.6
2,195,915	-		ABZR86_RS09890	0.48	+0.3
2,195,915	-		ABZR86_RS09890	0.48	-0.1
2,195,915	-		ABZR86_RS09890	0.48	-0.9
2,195,915	-		ABZR86_RS09890	0.48	+0.3
2,195,915	-		ABZR86_RS09890	0.48	-1.4
2,195,915	-		ABZR86_RS09890	0.48	+0.1
2,195,915	-		ABZR86_RS09890	0.48	+0.3
2,195,915	-		ABZR86_RS09890	0.48	+2.6
2,195,915	-		ABZR86_RS09890	0.48	+0.4
2,195,963	+		ABZR86_RS09890	0.53	+0.6
2,195,963	+		ABZR86_RS09890	0.53	-0.4
2,195,964	-		ABZR86_RS09890	0.53	+0.8
2,195,964	-		ABZR86_RS09890	0.53	-0.0
2,195,964	-		ABZR86_RS09890	0.53	+0.4
2,195,964	-		ABZR86_RS09890	0.53	+0.2
2,195,964	-		ABZR86_RS09890	0.53	-0.3
2,195,964	-		ABZR86_RS09890	0.53	-0.1
2,195,964	-		ABZR86_RS09890	0.53	-0.4
2,195,971	+		ABZR86_RS09890	0.54	-0.1
2,195,971	+		ABZR86_RS09890	0.54	-1.1
2,195,971	+		ABZR86_RS09890	0.54	-0.0
2,195,972	-		ABZR86_RS09890	0.54	-0.4
2,195,972	-		ABZR86_RS09890	0.54	-0.5
2,195,972	-		ABZR86_RS09890	0.54	+1.2
2,196,085	+		ABZR86_RS09890	0.65	+0.5
2,196,085	+		ABZR86_RS09890	0.65	-1.9
2,196,086	-		ABZR86_RS09890	0.65	+0.2
2,196,249	+		ABZR86_RS09890	0.80	-0.3
2,196,322	+		ABZR86_RS09890	0.87	-0.1
2,196,343	+		ABZR86_RS09890	0.89	-0.5
2,196,343	+		ABZR86_RS09890	0.89	-0.6
2,196,343	+		ABZR86_RS09890	0.89	+0.2
2,196,343	+		ABZR86_RS09890	0.89	+0.8
2,196,344	-		ABZR86_RS09890	0.90	+0.6
2,196,344	-		ABZR86_RS09890	0.90	+0.0
2,196,344	-		ABZR86_RS09890	0.90	+0.4
2,196,377	-				+0.3
2,196,377	-				-0.6