Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS09385

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
2,088,500	+				-0.2
2,088,705	-		ABZR86_RS09380	0.19	-1.0
2,088,711	+		ABZR86_RS09380	0.19	-1.8
2,088,870	+		ABZR86_RS09380	0.43	-2.2
2,088,870	+		ABZR86_RS09380	0.43	-1.6
2,088,871	-		ABZR86_RS09380	0.43	-2.6
2,088,933	+		ABZR86_RS09380	0.52	-3.0
2,088,935	+		ABZR86_RS09380	0.52	-1.6
2,089,161	+		ABZR86_RS09380	0.85	-0.4
2,089,161	+		ABZR86_RS09380	0.85	-2.1
2,089,161	+		ABZR86_RS09380	0.85	-2.4
2,089,394	+				-2.9
2,089,394	+				-2.6
2,089,394	+				-0.4
2,089,394	+				-4.0
2,089,395	-				-1.3
2,089,395	-				-3.0
2,089,395	-				-0.1
2,089,412	+		ABZR86_RS09385	0.11	-0.1
2,089,526	+		ABZR86_RS09385	0.19	-1.3
2,089,527	-		ABZR86_RS09385	0.19	-1.3
2,089,527	-		ABZR86_RS09385	0.19	-2.9
2,089,527	-		ABZR86_RS09385	0.19	-2.6
2,089,556	+		ABZR86_RS09385	0.21	-1.6
2,089,556	+		ABZR86_RS09385	0.21	+0.3
2,089,557	-		ABZR86_RS09385	0.21	-1.2
2,089,739	-		ABZR86_RS09385	0.33	-2.7
2,090,622	+				-1.7
2,090,622	+				-1.2
2,090,623	-				-3.7
2,090,627	+				+0.8
2,090,627	+				-0.8
2,090,627	+				-3.9
2,090,628	-				-1.2
2,090,628	-				+1.4
2,090,761	-				+0.3
2,090,806	+				-0.4
2,090,807	-				-0.8
2,090,807	-				+0.5
2,090,935	-		ABZR86_RS09390	0.11	-0.4
2,090,935	-		ABZR86_RS09390	0.11	+0.8
2,091,384	+		ABZR86_RS09390	0.37	-0.2
2,091,384	+		ABZR86_RS09390	0.37	+0.1
2,091,384	+		ABZR86_RS09390	0.37	+0.8
2,091,384	+		ABZR86_RS09390	0.37	-0.5
2,091,504	+		ABZR86_RS09390	0.45	-0.2
2,091,504	+		ABZR86_RS09390	0.45	-0.0
2,091,504	+		ABZR86_RS09390	0.45	+0.7
2,091,504	+		ABZR86_RS09390	0.45	+0.9
2,091,504	+		ABZR86_RS09390	0.45	+0.1
2,091,505	-		ABZR86_RS09390	0.45	-0.3
2,091,637	+		ABZR86_RS09390	0.53	-0.3