Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS07565

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
1,671,869	+				+0.8
1,671,869	+				+2.5
1,671,869	+				+1.0
1,671,869	+				+2.5
1,671,869	+				+0.6
1,671,870	-				-3.0
1,671,870	-				-0.3
1,671,870	-				+0.8
1,671,870	-				-0.5
1,671,870	-				-1.1
1,671,870	-				+0.1
1,671,870	-				+0.4
1,671,870	-				+1.3
1,671,870	-				-0.1
1,671,870	-				-1.0
1,671,870	-				-0.0
1,671,870	-				-0.7
1,671,870	-				-1.0
1,671,870	-				-1.1
1,671,913	+				+0.2
1,671,913	+				-0.2
1,671,914	-				-0.1
1,671,914	-				+1.0
1,672,350	-				-0.4
1,672,350	-				-2.2
1,672,386	-				-1.8
1,672,387	+				-1.0
1,672,387	+				-0.9
1,672,467	+				-3.1
1,672,495	+				-3.1
1,672,495	+				-0.0
1,672,495	+				+0.5
1,672,545	-				-4.0
1,672,548	+				-2.3
1,672,548	+				-3.6
1,672,548	+				-2.2
1,672,548	+				-2.3
1,672,548	+				-2.7
1,672,548	+				-2.5
1,672,548	+				-4.4
1,672,548	+				-2.1
1,672,549	-				-0.8
1,672,549	-				-3.1
1,672,549	-				-0.2
1,672,549	-				-2.1
1,672,549	-				-0.7
1,672,549	-				-2.5
1,672,549	-				-1.1
1,672,550	+				-3.3
1,672,550	+				-2.9
1,672,550	+				-1.5
1,672,550	+				-2.6
1,672,550	+				-2.6
1,672,551	-				-2.3
1,672,551	-				-4.3
1,672,551	-				-3.5
1,672,551	-				-1.5
1,672,551	-				-0.6
1,672,795	+		ABZR86_RS07565	0.19	-2.8
1,672,795	+		ABZR86_RS07565	0.19	-3.1
1,672,796	-		ABZR86_RS07565	0.19	-2.2
1,672,855	+		ABZR86_RS07565	0.24	-2.2
1,672,855	+		ABZR86_RS07565	0.24	-2.7
1,672,855	+		ABZR86_RS07565	0.24	-4.1
1,672,855	+		ABZR86_RS07565	0.24	-2.5
1,672,856	-		ABZR86_RS07565	0.24	-3.6
1,672,856	-		ABZR86_RS07565	0.24	-0.9
1,672,909	+		ABZR86_RS07565	0.28	-3.0
1,672,909	+		ABZR86_RS07565	0.28	+0.2
1,672,909	+		ABZR86_RS07565	0.28	-2.2
1,672,910	-		ABZR86_RS07565	0.29	-3.4
1,672,910	-		ABZR86_RS07565	0.29	-2.1
1,672,910	-		ABZR86_RS07565	0.29	-1.8
1,672,910	-		ABZR86_RS07565	0.29	-2.3
1,672,963	+		ABZR86_RS07565	0.33	-1.7
1,673,209	+		ABZR86_RS07565	0.53	-1.8
1,673,209	+		ABZR86_RS07565	0.53	-3.8
1,673,209	+		ABZR86_RS07565	0.53	-2.8
1,673,209	+		ABZR86_RS07565	0.53	-3.1
1,673,210	-		ABZR86_RS07565	0.53	-4.4
1,673,210	-		ABZR86_RS07565	0.53	-3.4
1,673,210	-		ABZR86_RS07565	0.53	-2.2
1,673,210	-		ABZR86_RS07565	0.53	-1.8
1,673,210	-		ABZR86_RS07565	0.53	-3.3
1,673,210	-		ABZR86_RS07565	0.53	-2.0
1,673,335	+		ABZR86_RS07565	0.64	-2.3
1,673,335	+		ABZR86_RS07565	0.64	-2.5
1,673,335	+		ABZR86_RS07565	0.64	-1.4
1,673,335	+		ABZR86_RS07565	0.64	-1.8
1,673,335	+		ABZR86_RS07565	0.64	-3.0
1,673,335	+		ABZR86_RS07565	0.64	-3.0
1,673,336	-		ABZR86_RS07565	0.64	-4.0
1,673,336	-		ABZR86_RS07565	0.64	-1.5
1,673,336	-		ABZR86_RS07565	0.64	-1.5
1,673,449	+		ABZR86_RS07565	0.73	-0.7
1,673,449	+		ABZR86_RS07565	0.73	-1.7
1,673,449	+		ABZR86_RS07565	0.73	-1.9
1,673,449	+		ABZR86_RS07565	0.73	-4.1
1,673,449	+		ABZR86_RS07565	0.73	-1.8
1,673,449	+		ABZR86_RS07565	0.73	-2.5
1,673,449	+		ABZR86_RS07565	0.73	-3.5
1,673,449	+		ABZR86_RS07565	0.73	-4.4
1,673,449	+		ABZR86_RS07565	0.73	-3.1
1,673,450	-		ABZR86_RS07565	0.73	-0.6
1,673,450	-		ABZR86_RS07565	0.73	-1.1
1,673,450	-		ABZR86_RS07565	0.73	-3.2
1,673,450	-		ABZR86_RS07565	0.73	-3.5
1,673,536	+		ABZR86_RS07565	0.80	-2.9
1,673,536	+		ABZR86_RS07565	0.80	-1.3
1,673,537	-		ABZR86_RS07565	0.80	+0.3
1,673,835	-				-3.6
1,673,835	-				-2.1
1,673,918	+				-3.3
1,673,918	+				-2.3
1,673,918	+				-1.8
1,673,919	-				+1.1
1,673,919	-				-3.1
1,673,919	-				-3.3
1,673,919	-				-2.3
1,673,919	-				-0.3
1,674,019	+				-2.0
1,674,019	+				-3.5
1,674,019	+				-2.1
1,674,019	+				-3.9
1,674,019	+				-3.4
1,674,020	-				-3.2
1,674,020	-				-2.0
1,674,020	-				-1.9
1,674,020	-				-3.1
1,674,020	-				-2.2
1,674,335	-		ABZR86_RS07570	0.17	-2.5
1,674,377	-		ABZR86_RS07570	0.18	-1.2
1,674,613	+		ABZR86_RS07570	0.26	-1.1
1,674,613	+		ABZR86_RS07570	0.26	-1.0
1,674,614	-		ABZR86_RS07570	0.26	-2.5
1,674,614	-		ABZR86_RS07570	0.26	-3.3
1,674,770	-		ABZR86_RS07570	0.31	-1.8