Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS07175

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
1,579,688	+		ABZR86_RS07170	0.44	+0.1
1,579,688	+		ABZR86_RS07170	0.44	-0.9
1,579,688	+		ABZR86_RS07170	0.44	-0.3
1,579,688	+		ABZR86_RS07170	0.44	-2.1
1,579,689	-		ABZR86_RS07170	0.44	+0.3
1,579,689	-		ABZR86_RS07170	0.44	-0.5
1,579,689	-		ABZR86_RS07170	0.44	-1.1
1,579,689	-		ABZR86_RS07170	0.44	+0.5
1,579,778	+		ABZR86_RS07170	0.50	-0.8
1,579,778	+		ABZR86_RS07170	0.50	-0.9
1,579,778	+		ABZR86_RS07170	0.50	-1.0
1,579,778	+		ABZR86_RS07170	0.50	-2.0
1,579,778	+		ABZR86_RS07170	0.50	-1.0
1,579,778	+		ABZR86_RS07170	0.50	+0.1
1,579,778	+		ABZR86_RS07170	0.50	-0.8
1,579,778	+		ABZR86_RS07170	0.50	+0.2
1,579,779	-		ABZR86_RS07170	0.50	-0.5
1,579,779	-		ABZR86_RS07170	0.50	-0.1
1,579,779	-		ABZR86_RS07170	0.50	-1.4
1,579,779	-		ABZR86_RS07170	0.50	-0.0
1,579,779	-		ABZR86_RS07170	0.50	-1.2
1,579,779	-		ABZR86_RS07170	0.50	-1.9
1,579,779	-		ABZR86_RS07170	0.50	+0.5
1,579,880	+		ABZR86_RS07170	0.57	+0.8
1,579,880	+		ABZR86_RS07170	0.57	+0.1
1,579,880	+		ABZR86_RS07170	0.57	+0.4
1,579,880	+		ABZR86_RS07170	0.57	-0.4
1,579,881	-		ABZR86_RS07170	0.57	-2.9
1,579,881	-		ABZR86_RS07170	0.57	+0.6
1,579,881	-		ABZR86_RS07170	0.57	-0.1
1,579,881	-		ABZR86_RS07170	0.57	-0.2
1,579,881	-		ABZR86_RS07170	0.57	-1.3
1,579,881	-		ABZR86_RS07170	0.57	+0.5
1,579,881	-		ABZR86_RS07170	0.57	-1.0
1,579,881	-		ABZR86_RS07170	0.57	+0.4
1,579,881	-		ABZR86_RS07170	0.57	-2.3
1,579,943	+		ABZR86_RS07170	0.61	-0.1
1,579,943	+		ABZR86_RS07170	0.61	-3.1
1,579,943	+		ABZR86_RS07170	0.61	+0.0
1,579,943	+		ABZR86_RS07170	0.61	+0.5
1,579,943	+		ABZR86_RS07170	0.61	+1.2
1,579,944	-		ABZR86_RS07170	0.61	-1.5
1,579,944	-		ABZR86_RS07170	0.61	-1.2
1,579,944	-		ABZR86_RS07170	0.61	-0.7
1,580,066	+		ABZR86_RS07170	0.69	-0.1
1,580,157	+		ABZR86_RS07170	0.75	+0.7
1,580,171	+		ABZR86_RS07170	0.76	-0.1
1,580,171	+		ABZR86_RS07170	0.76	-0.6
1,580,171	+		ABZR86_RS07170	0.76	-0.4
1,580,171	+		ABZR86_RS07170	0.76	+1.1
1,580,172	-		ABZR86_RS07170	0.76	-1.2
1,580,172	-		ABZR86_RS07170	0.76	+0.2
1,580,172	-		ABZR86_RS07170	0.76	-2.6
1,580,172	-		ABZR86_RS07170	0.76	+0.3
1,580,172	-		ABZR86_RS07170	0.76	+0.4
1,580,172	-		ABZR86_RS07170	0.76	-2.2
1,580,172	-		ABZR86_RS07170	0.76	+0.2
1,580,268	+		ABZR86_RS07170	0.83	-1.4
1,580,268	+		ABZR86_RS07170	0.83	+0.4
1,580,269	-		ABZR86_RS07170	0.83	-0.9
1,580,269	-		ABZR86_RS07170	0.83	-0.9
1,580,345	+		ABZR86_RS07170	0.88	-0.1
1,580,345	+		ABZR86_RS07170	0.88	-1.2
1,580,345	+		ABZR86_RS07170	0.88	-1.0
1,580,346	-		ABZR86_RS07170	0.88	-2.4
1,580,346	-		ABZR86_RS07170	0.88	-0.8
1,580,346	-		ABZR86_RS07170	0.88	-1.7
1,580,346	-		ABZR86_RS07170	0.88	-0.0
1,580,346	-		ABZR86_RS07170	0.88	+1.7
1,580,430	+				-1.3
1,580,624	+				+0.1
1,580,625	-				-1.6
1,580,625	-				-0.6
1,580,625	-				-0.8
1,580,625	-				+0.8
1,580,756	+		ABZR86_RS07175	0.12	-2.9
1,580,756	+		ABZR86_RS07175	0.12	-1.7
1,580,756	+		ABZR86_RS07175	0.12	+0.4
1,580,757	-		ABZR86_RS07175	0.12	-0.2
1,580,757	-		ABZR86_RS07175	0.12	-2.5
1,580,801	+		ABZR86_RS07175	0.19	+1.5
1,580,903	+		ABZR86_RS07175	0.33	-1.5
1,581,437	+		ABZR86_RS07180	0.12	-0.5
1,581,438	-		ABZR86_RS07180	0.12	-1.4
1,581,490	+		ABZR86_RS07180	0.21	-1.5
1,581,490	+		ABZR86_RS07180	0.21	-0.9
1,581,519	-		ABZR86_RS07180	0.26	-0.7
1,581,519	-		ABZR86_RS07180	0.26	-2.5
1,581,733	+		ABZR86_RS07180	0.62	-1.1
1,581,733	+		ABZR86_RS07180	0.62	-0.3
1,581,733	+		ABZR86_RS07180	0.62	-1.1
1,581,734	-		ABZR86_RS07180	0.62	-1.2
1,581,744	-		ABZR86_RS07180	0.64	-1.1
1,581,744	-		ABZR86_RS07180	0.64	-0.4
1,581,745	+		ABZR86_RS07180	0.64	-1.3
1,581,746	-		ABZR86_RS07180	0.64	-0.5
1,581,746	-		ABZR86_RS07180	0.64	-1.1
1,581,746	-		ABZR86_RS07180	0.64	-0.3
1,581,746	-		ABZR86_RS07180	0.64	+0.1
1,581,830	-		ABZR86_RS07180	0.78	+0.2
1,581,830	-		ABZR86_RS07180	0.78	-1.0
1,581,841	+		ABZR86_RS07180	0.80	+0.1
1,581,875	-		ABZR86_RS07180	0.86	-1.4
1,582,027	-				-0.8
1,582,027	-				-1.0
1,582,078	+				+0.4
1,582,079	-				+0.2
1,582,079	-				-0.0
1,582,079	-				+1.3
1,582,123	+				-1.1
1,582,123	+				+0.1
1,582,123	+				+0.3
1,582,124	-				-0.5
1,582,124	-				-0.8
1,582,125	+				+0.6
1,582,126	-				+0.4
1,582,126	-				-0.2
1,582,126	-				-0.4
1,582,126	-				+0.1
1,582,126	-				+0.2
1,582,253	+				+0.1
1,582,254	-				-0.3
1,582,254	-				+0.4
1,582,254	-				-0.0
1,582,254	-				-1.2