Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS05665

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
1,279,672	+		ABZR86_RS05660	0.29	+0.4
1,279,672	+		ABZR86_RS05660	0.29	-0.6
1,279,673	-		ABZR86_RS05660	0.30	+1.6
1,279,861	+		ABZR86_RS05660	0.47	-0.9
1,279,861	+		ABZR86_RS05660	0.47	+3.2
1,279,861	+		ABZR86_RS05660	0.47	+0.3
1,279,861	+		ABZR86_RS05660	0.47	-0.0
1,279,862	-		ABZR86_RS05660	0.47	+0.5
1,279,862	-		ABZR86_RS05660	0.47	-0.6
1,279,862	-		ABZR86_RS05660	0.47	-0.2
1,279,991	+		ABZR86_RS05660	0.60	+0.5
1,279,992	-		ABZR86_RS05660	0.60	-0.0
1,280,093	+		ABZR86_RS05660	0.69	-0.7
1,280,222	+		ABZR86_RS05660	0.81	-3.1
1,280,222	+		ABZR86_RS05660	0.81	-0.2
1,280,223	-		ABZR86_RS05660	0.81	-0.7
1,280,223	-		ABZR86_RS05660	0.81	-1.4
1,280,223	-		ABZR86_RS05660	0.81	+0.3
1,280,223	-		ABZR86_RS05660	0.81	+0.0
1,280,223	-		ABZR86_RS05660	0.81	+2.9
1,280,350	+				-0.6
1,280,350	+				-2.1
1,280,350	+				-0.4
1,280,350	+				-1.3
1,280,350	+				-1.3
1,280,351	-				+0.7
1,280,351	-				-0.2
1,280,448	+				-1.2
1,280,448	+				-0.3
1,280,448	+				-2.8
1,280,448	+				-0.0
1,280,448	+				-1.2
1,280,449	-				+0.7
1,280,449	-				+0.4
1,280,455	+				+0.1
1,280,455	+				-1.4
1,280,456	-				-2.1
1,280,456	-				+0.9
1,280,456	-				-0.2
1,280,456	-				-0.3
1,280,456	-				-1.3
1,280,456	-				-0.1
1,280,456	-				+0.3
1,280,456	-				-0.2
1,280,456	-				-1.6
1,280,461	+				-0.5
1,280,461	+				-0.1
1,280,461	+				-1.2
1,280,461	+				-0.5
1,280,461	+				+0.5
1,280,462	-				+0.6
1,280,462	-				-1.3
1,280,462	-				+0.6
1,280,548	+				-0.5
1,280,548	+				-1.1
1,280,548	+				+0.7
1,280,548	+				+0.7
1,280,548	+				-1.2
1,280,548	+				+1.4
1,280,548	+				+0.7
1,280,548	+				+0.4
1,280,548	+				-1.0
1,280,548	+				+0.4
1,280,549	-				+0.3
1,280,549	-				-0.3
1,280,549	-				+0.4
1,280,549	-				-1.7
1,280,549	-				-0.2
1,280,549	-				+1.3
1,280,549	-				-0.6
1,280,563	+				-0.2
1,280,563	+				+0.0
1,280,563	+				+0.1
1,280,563	+				+1.3
1,280,563	+				-0.6
1,280,564	-				+0.1
1,280,564	-				-1.1
1,280,564	-				-0.9
1,280,564	-				-2.6
1,280,564	-				-1.1
1,280,595	+				-3.3
1,280,595	+				-1.7
1,280,595	+				-2.6
1,280,595	+				-2.9
1,280,595	+				-3.5
1,280,595	+				-0.9
1,280,617	+				-3.4
1,280,617	+				-1.3
1,280,617	+				-1.6
1,280,617	+				-1.7
1,280,617	+				-3.4
1,280,618	-				-1.5
1,280,618	-				-2.2
1,280,618	-				-3.3
1,280,618	-				-1.1
1,281,027	+		ABZR86_RS05665	0.27	-1.9
1,281,027	+		ABZR86_RS05665	0.27	-2.8
1,281,028	-		ABZR86_RS05665	0.27	-3.3
1,281,028	-		ABZR86_RS05665	0.27	-2.5
1,281,181	+		ABZR86_RS05665	0.36	-2.8
1,281,181	+		ABZR86_RS05665	0.36	-2.3
1,281,182	-		ABZR86_RS05665	0.36	-0.2
1,281,438	+		ABZR86_RS05665	0.51	-2.5
1,281,452	-		ABZR86_RS05665	0.52	-0.5
1,281,471	+		ABZR86_RS05665	0.53	-3.2
1,281,471	+		ABZR86_RS05665	0.53	-2.6
1,281,471	+		ABZR86_RS05665	0.53	-1.3
1,281,471	+		ABZR86_RS05665	0.53	-1.8
1,281,471	+		ABZR86_RS05665	0.53	-1.5
1,281,471	+		ABZR86_RS05665	0.53	-0.4
1,281,472	-		ABZR86_RS05665	0.53	-1.3
1,281,648	+		ABZR86_RS05665	0.64	-2.2
1,281,649	-		ABZR86_RS05665	0.64	+0.2
1,281,649	-		ABZR86_RS05665	0.64	+0.9
1,282,459	+				-1.0
1,282,459	+				+0.2
1,282,464	+				-0.2
1,282,521	+		ABZR86_RS05670	0.17	-0.6
1,282,521	+		ABZR86_RS05670	0.17	+0.2
1,282,521	+		ABZR86_RS05670	0.17	+0.4
1,282,521	+		ABZR86_RS05670	0.17	-0.6
1,282,521	+		ABZR86_RS05670	0.17	+0.7
1,282,521	+		ABZR86_RS05670	0.17	+0.7
1,282,521	+		ABZR86_RS05670	0.17	+0.0
1,282,521	+		ABZR86_RS05670	0.17	-0.4
1,282,522	-		ABZR86_RS05670	0.17	+0.1
1,282,522	-		ABZR86_RS05670	0.17	+0.0
1,282,522	-		ABZR86_RS05670	0.17	+1.9
1,282,522	-		ABZR86_RS05670	0.17	-1.0
1,282,522	-		ABZR86_RS05670	0.17	-0.0
1,282,522	-		ABZR86_RS05670	0.17	+2.0
1,282,522	-		ABZR86_RS05670	0.17	-1.6
1,282,522	-		ABZR86_RS05670	0.17	+1.0
1,282,755	+		ABZR86_RS05670	0.53	-0.5
1,282,755	+		ABZR86_RS05670	0.53	-0.1
1,282,755	+		ABZR86_RS05670	0.53	+0.1
1,282,755	+		ABZR86_RS05670	0.53	-2.2
1,282,791	+		ABZR86_RS05670	0.59	-1.4
1,282,791	+		ABZR86_RS05670	0.59	+0.3
1,282,791	+		ABZR86_RS05670	0.59	-1.2
1,282,792	-		ABZR86_RS05670	0.59	-0.3
1,282,792	-		ABZR86_RS05670	0.59	-0.4
1,282,792	-		ABZR86_RS05670	0.59	+0.2
1,282,792	-		ABZR86_RS05670	0.59	+0.1
1,282,792	-		ABZR86_RS05670	0.59	-0.5
1,282,792	-		ABZR86_RS05670	0.59	+0.5
1,282,792	-		ABZR86_RS05670	0.59	-0.7
1,282,817	+		ABZR86_RS05670	0.63	+0.3
1,282,817	+		ABZR86_RS05670	0.63	+0.8
1,282,818	-		ABZR86_RS05670	0.63	+0.9
1,282,818	-		ABZR86_RS05670	0.63	-1.6
1,283,021	+				+0.1
1,283,021	+				+2.0
1,283,021	+				+0.1
1,283,021	+				-2.3
1,283,022	-				-0.4
1,283,022	-				-1.5
1,283,022	-				-0.5
1,283,022	-				-0.1
1,283,022	-				+0.5
1,283,052	+				+1.0
1,283,052	+				+0.5
1,283,052	+				-0.8
1,283,052	+				-0.6
1,283,052	+				+1.5
1,283,052	+				+0.3
1,283,052	+				-0.6
1,283,052	+				-1.5
1,283,052	+				-0.9
1,283,052	+				+0.1
1,283,052	+				-1.2
1,283,052	+				-2.8
1,283,052	+				+0.1
1,283,053	-				-0.5
1,283,053	-				-0.2
1,283,053	-				-0.6
1,283,053	-				+0.4
1,283,053	-				+0.6
1,283,053	-				+1.6
1,283,053	-				+0.5
1,283,053	-				-1.0
1,283,053	-				-1.3
1,283,053	-				+0.5
1,283,053	-				-0.2
1,283,053	-				+0.3
1,283,053	-				-0.0
1,283,069	+				+0.5
1,283,069	+				-0.9
1,283,069	+				+0.5
1,283,069	+				+0.1
1,283,069	+				+0.4
1,283,069	+				+0.2
1,283,069	+				+0.1
1,283,069	+				-0.1
1,283,069	+				-1.8
1,283,069	+				-0.5
1,283,069	+				+0.7
1,283,070	-				+0.5
1,283,070	-				-0.5
1,283,070	-				+0.1
1,283,070	-				+1.4
1,283,070	-				-0.6
1,283,070	-				-0.1
1,283,070	-				-0.5
1,283,070	-				-1.1
1,283,070	-				+0.4
1,283,070	-				+0.4
1,283,070	-				+0.3
1,283,071	+				-0.2
1,283,071	+				-0.1
1,283,071	+				-0.1
1,283,071	+				-0.4
1,283,071	+				-1.0
1,283,071	+				+0.1
1,283,072	-				+0.0
1,283,072	-				+0.3
1,283,072	-				-0.7
1,283,072	-				+0.5
1,283,229	+				-0.0
1,283,229	+				-1.1
1,283,229	+				-1.5
1,283,229	+				-0.8
1,283,229	+				-0.1
1,283,229	+				+1.0
1,283,229	+				-0.7
1,283,229	+				-0.4
1,283,229	+				+1.0
1,283,229	+				+1.5
1,283,229	+				+2.1
1,283,229	+				-0.4
1,283,229	+				+0.1
1,283,230	-				+0.4
1,283,230	-				+0.5
1,283,230	-				-0.4
1,283,230	-				+0.0
1,283,230	-				-0.3
1,283,230	-				-0.4
1,283,230	-				+0.5
1,283,230	-				-1.3
1,283,230	-				-1.6
1,283,230	-				+0.4
1,283,230	-				+0.5
1,283,230	-				+0.3