Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS05570

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
1,259,316	-				-1.3
1,259,316	-				+0.1
1,259,316	-				+0.5
1,259,316	-				-0.3
1,259,375	-				-1.8
1,259,375	-				+0.1
1,259,375	-				-0.4
1,259,375	-				-0.7
1,259,375	-				-1.1
1,259,375	-				+0.3
1,259,375	-				-0.0
1,259,375	-				+0.7
1,259,453	-		ABZR86_RS05570	0.10	-0.8
1,259,516	-		ABZR86_RS05570	0.19	+0.1
1,259,516	-		ABZR86_RS05570	0.19	-1.3
1,259,587	-		ABZR86_RS05570	0.30	-2.4
1,259,634	+		ABZR86_RS05570	0.37	-1.1
1,259,634	+		ABZR86_RS05570	0.37	-1.3
1,259,634	+		ABZR86_RS05570	0.37	-1.6
1,259,635	-		ABZR86_RS05570	0.37	-0.9
1,259,635	-		ABZR86_RS05570	0.37	+3.1
1,259,635	-		ABZR86_RS05570	0.37	-0.4
1,259,635	-		ABZR86_RS05570	0.37	-1.6
1,259,950	-		ABZR86_RS05570	0.82	+0.6
1,260,100	+				-0.7
1,260,101	-				-1.7
1,260,105	+				-0.2
1,260,106	-				+0.4
1,260,135	+				-2.4
1,260,135	+				-1.1
1,260,135	+				-0.7
1,260,135	+				+0.4
1,260,135	+				+0.2
1,260,135	+				+0.1
1,260,135	+				-0.1
1,260,135	+				+0.6
1,260,136	-				+1.2
1,260,136	-				-0.6
1,260,136	-				+1.0
1,260,136	-				+0.3
1,260,136	-				+0.9
1,260,136	-				+1.3
1,260,136	-				+0.8
1,260,136	-				+0.4
1,260,136	-				-0.7
1,260,139	+				-1.3
1,260,139	+				+0.2
1,260,139	+				+0.2
1,260,139	+				+1.4
1,260,140	-				-0.5
1,260,140	-				-0.8
1,260,140	-				+0.4
1,260,140	-				+0.7
1,260,274	+		ABZR86_RS05575	0.36	-0.5
1,260,274	+		ABZR86_RS05575	0.36	-0.2
1,260,274	+		ABZR86_RS05575	0.36	-0.2
1,260,274	+		ABZR86_RS05575	0.36	+0.9
1,260,274	+		ABZR86_RS05575	0.36	-0.9
1,260,274	+		ABZR86_RS05575	0.36	+0.9
1,260,274	+		ABZR86_RS05575	0.36	+0.8
1,260,274	+		ABZR86_RS05575	0.36	+2.1
1,260,274	+		ABZR86_RS05575	0.36	+0.2
1,260,274	+		ABZR86_RS05575	0.36	-1.2
1,260,274	+		ABZR86_RS05575	0.36	-0.2
1,260,274	+		ABZR86_RS05575	0.36	+1.4
1,260,275	-		ABZR86_RS05575	0.36	-1.3
1,260,275	-		ABZR86_RS05575	0.36	+0.2
1,260,275	-		ABZR86_RS05575	0.36	-1.1
1,260,275	-		ABZR86_RS05575	0.36	+1.8
1,260,275	-		ABZR86_RS05575	0.36	+2.5
1,260,275	-		ABZR86_RS05575	0.36	+0.6
1,260,275	-		ABZR86_RS05575	0.36	+0.5
1,260,275	-		ABZR86_RS05575	0.36	+0.8
1,260,283	+		ABZR86_RS05575	0.39	+0.0
1,260,283	+		ABZR86_RS05575	0.39	+0.5
1,260,284	-		ABZR86_RS05575	0.39	+0.2
1,260,284	-		ABZR86_RS05575	0.39	+2.0
1,260,284	-		ABZR86_RS05575	0.39	-0.6
1,260,284	-		ABZR86_RS05575	0.39	+0.6
1,260,284	-		ABZR86_RS05575	0.39	+0.4
1,260,284	-		ABZR86_RS05575	0.39	+0.2
1,260,284	-		ABZR86_RS05575	0.39	-0.4
1,260,284	-		ABZR86_RS05575	0.39	-0.2
1,260,284	-		ABZR86_RS05575	0.39	-1.4
1,260,355	+		ABZR86_RS05575	0.67	-0.4
1,260,356	-		ABZR86_RS05575	0.67	+0.7
1,260,356	-		ABZR86_RS05575	0.67	+1.3
1,260,356	-		ABZR86_RS05575	0.67	-1.1
1,260,356	-		ABZR86_RS05575	0.67	+0.7
1,260,409	+		ABZR86_RS05575	0.87	+0.4
1,260,409	+		ABZR86_RS05575	0.87	+0.1
1,260,409	+		ABZR86_RS05575	0.87	+0.2
1,260,409	+		ABZR86_RS05575	0.87	-0.9
1,260,410	-		ABZR86_RS05575	0.88	+0.1
1,260,479	+				+0.3
1,260,479	+				-0.5
1,260,479	+				-1.1
1,260,480	-				-0.7
1,260,480	-				+0.8
1,260,507	+				-2.4
1,260,507	+				+1.5
1,260,507	+				+0.9
1,260,508	-				+1.6
1,260,508	-				-0.4
1,260,508	-				-0.7
1,260,508	-				-0.1
1,260,508	-				-0.3
1,260,508	-				-2.0
1,260,515	-				-0.2
1,260,515	-				+0.6
1,260,515	-				+0.6
1,260,549	+				-0.4
1,260,549	+				-0.7
1,260,549	+				-1.0
1,260,549	+				+0.1
1,260,549	+				+0.1
1,260,549	+				+1.2
1,260,549	+				-0.3
1,260,549	+				+0.7
1,260,549	+				+0.9
1,260,550	-				-0.4
1,260,550	-				-0.7
1,260,550	-				-0.2
1,260,550	-				+1.2
1,260,550	-				-0.1
1,260,550	-				+0.2
1,260,550	-				-0.1
1,260,616	+				+0.3
1,260,616	+				-2.3
1,260,617	-				-1.7
1,260,617	-				-0.2
1,260,617	-				-0.9
1,260,617	-				+0.0
1,260,634	+				+0.8
1,260,634	+				-1.2
1,260,634	+				-0.1
1,260,634	+				-2.7
1,260,635	-				-0.1
1,260,835	+		ABZR86_RS05580	0.16	+0.2
1,260,836	-		ABZR86_RS05580	0.16	-0.5
1,260,974	-		ABZR86_RS05580	0.23	+0.2
1,261,006	+		ABZR86_RS05580	0.25	-0.4
1,261,006	+		ABZR86_RS05580	0.25	-0.2
1,261,006	+		ABZR86_RS05580	0.25	-1.1
1,261,007	-		ABZR86_RS05580	0.25	+0.1
1,261,007	-		ABZR86_RS05580	0.25	-1.1
1,261,007	-		ABZR86_RS05580	0.25	-0.1