Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS05060

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
1,140,187	+		ABZR86_RS05050	0.37	+0.4
1,140,188	-		ABZR86_RS05050	0.37	+0.1
1,140,707	+		ABZR86_RS05055	0.22	-0.2
1,140,708	-		ABZR86_RS05055	0.22	+0.0
1,140,959	+		ABZR86_RS05055	0.83	+0.2
1,140,959	+		ABZR86_RS05055	0.83	+0.3
1,140,959	+		ABZR86_RS05055	0.83	-0.9
1,140,960	-		ABZR86_RS05055	0.84	+0.6
1,140,960	-		ABZR86_RS05055	0.84	-0.4
1,141,018	+				-0.7
1,141,018	+				+2.6
1,141,153	-				-0.2
1,141,153	-				+1.0
1,141,153	-				-0.2
1,141,153	-				+0.8
1,141,158	+				+0.2
1,141,491	+		ABZR86_RS05060	0.25	-0.5
1,141,980	+		ABZR86_RS05060	0.52	+0.0
1,142,151	+		ABZR86_RS05060	0.62	+1.6
1,142,152	-		ABZR86_RS05060	0.62	-0.5
1,142,152	-		ABZR86_RS05060	0.62	+0.1
1,142,392	-		ABZR86_RS05060	0.75	-0.2
1,142,392	-		ABZR86_RS05060	0.75	+0.6
1,142,460	+		ABZR86_RS05060	0.79	-0.0
1,142,461	-		ABZR86_RS05060	0.79	+0.4
1,142,461	-		ABZR86_RS05060	0.79	-0.5
1,142,461	-		ABZR86_RS05060	0.79	-0.3
1,142,463	+		ABZR86_RS05060	0.79	-0.1
1,142,463	+		ABZR86_RS05060	0.79	+0.3
1,142,463	+		ABZR86_RS05060	0.79	+0.1
1,142,464	-		ABZR86_RS05060	0.80	+0.1
1,142,464	-		ABZR86_RS05060	0.80	-0.8
1,142,560	-		ABZR86_RS05060	0.85	+0.4
1,142,823	+				-0.3
1,142,824	-				-0.4
1,142,882	-				-0.9
1,142,959	+				+2.4
1,142,960	-				+0.3
1,143,112	+		ABZR86_RS05065	0.15	-0.1
1,143,319	+		ABZR86_RS05065	0.28	+1.1
1,143,320	-		ABZR86_RS05065	0.28	-0.0
1,143,320	-		ABZR86_RS05065	0.28	+0.0
1,143,472	+		ABZR86_RS05065	0.37	+0.1
1,143,493	+		ABZR86_RS05065	0.39	+3.3
1,143,493	+		ABZR86_RS05065	0.39	-0.6
1,143,494	-		ABZR86_RS05065	0.39	-0.2
1,143,494	-		ABZR86_RS05065	0.39	-1.4
1,143,494	-		ABZR86_RS05065	0.39	-0.9
1,143,494	-		ABZR86_RS05065	0.39	-1.1
1,143,688	+		ABZR86_RS05065	0.51	-0.5
1,143,734	-		ABZR86_RS05065	0.54	+0.1
1,143,745	+		ABZR86_RS05065	0.55	-0.2
1,143,745	+		ABZR86_RS05065	0.55	+0.3
1,143,745	+		ABZR86_RS05065	0.55	-1.6
1,143,745	+		ABZR86_RS05065	0.55	+0.3
1,143,745	+		ABZR86_RS05065	0.55	+0.4
1,143,746	-		ABZR86_RS05065	0.55	-0.1
1,143,746	-		ABZR86_RS05065	0.55	+0.1
1,143,746	-		ABZR86_RS05065	0.55	+0.7
1,143,746	-		ABZR86_RS05065	0.55	-0.1
1,143,784	+		ABZR86_RS05065	0.57	-1.5
1,143,784	+		ABZR86_RS05065	0.57	+0.2
1,143,784	+		ABZR86_RS05065	0.57	-1.8
1,143,784	+		ABZR86_RS05065	0.57	-1.5
1,143,785	-		ABZR86_RS05065	0.57	+0.0
1,143,785	-		ABZR86_RS05065	0.57	-0.3
1,143,785	-		ABZR86_RS05065	0.57	-0.5
1,143,785	-		ABZR86_RS05065	0.57	+0.3
1,143,785	-		ABZR86_RS05065	0.57	-0.1