Experiment: Nalidixic 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04220 and ABZR86_RS04225 are separated by 92 nucleotides ABZR86_RS04225 and ABZR86_RS04230 are separated by 512 nucleotides ABZR86_RS04230 and ABZR86_RS04235 are separated by 13 nucleotides
ABZR86_RS04220: ABZR86_RS04220 - amino acid adenylation domain-containing protein, at 947,181 to 950,255
_RS04220
ABZR86_RS04225: ABZR86_RS04225 - MbtH family protein, at 950,348 to 950,566
_RS04225
ABZR86_RS04230: ABZR86_RS04230 - amidohydrolase family protein, at 951,079 to 952,584
_RS04230
ABZR86_RS04235: ABZR86_RS04235 - LysR family transcriptional regulator, at 952,598 to 953,491
_RS04235
Position (kb) 951
952
953 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 950.101 kb on + strand at 950.227 kb on + strand at 950.227 kb on + strand at 950.227 kb on + strand at 950.228 kb on - strand at 950.349 kb on + strand at 950.395 kb on + strand, within ABZR86_RS04225 at 950.395 kb on + strand, within ABZR86_RS04225 at 950.395 kb on + strand, within ABZR86_RS04225 at 950.396 kb on - strand, within ABZR86_RS04225 at 950.407 kb on + strand, within ABZR86_RS04225 at 950.407 kb on + strand, within ABZR86_RS04225 at 950.408 kb on - strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.418 kb on + strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.419 kb on - strand, within ABZR86_RS04225 at 950.617 kb on + strand at 950.617 kb on + strand at 950.719 kb on - strand at 950.740 kb on + strand at 950.741 kb on - strand at 950.743 kb on + strand at 950.743 kb on + strand at 950.743 kb on + strand at 950.743 kb on + strand at 950.743 kb on + strand at 950.744 kb on - strand at 950.744 kb on - strand at 950.744 kb on - strand at 950.765 kb on + strand at 950.765 kb on + strand at 950.766 kb on - strand at 950.826 kb on + strand at 950.826 kb on + strand at 950.826 kb on + strand at 950.826 kb on + strand at 950.827 kb on - strand at 950.878 kb on + strand at 950.911 kb on - strand at 950.911 kb on - strand at 950.962 kb on + strand at 950.963 kb on - strand at 951.090 kb on + strand at 951.090 kb on + strand at 951.090 kb on + strand at 951.090 kb on + strand at 951.093 kb on + strand at 951.093 kb on + strand at 951.093 kb on + strand at 951.093 kb on + strand at 951.094 kb on - strand at 951.094 kb on - strand at 951.147 kb on + strand at 951.184 kb on + strand at 951.185 kb on - strand at 951.409 kb on + strand, within ABZR86_RS04230 at 951.475 kb on + strand, within ABZR86_RS04230 at 951.475 kb on + strand, within ABZR86_RS04230 at 951.476 kb on - strand, within ABZR86_RS04230 at 951.498 kb on + strand, within ABZR86_RS04230 at 951.499 kb on - strand, within ABZR86_RS04230 at 951.499 kb on - strand, within ABZR86_RS04230 at 951.499 kb on - strand, within ABZR86_RS04230 at 951.504 kb on + strand, within ABZR86_RS04230 at 951.505 kb on - strand, within ABZR86_RS04230 at 951.515 kb on + strand, within ABZR86_RS04230 at 951.516 kb on - strand, within ABZR86_RS04230 at 951.516 kb on - strand, within ABZR86_RS04230 at 951.516 kb on - strand, within ABZR86_RS04230 at 951.516 kb on - strand, within ABZR86_RS04230 at 951.760 kb on + strand, within ABZR86_RS04230 at 951.761 kb on - strand, within ABZR86_RS04230 at 951.761 kb on - strand, within ABZR86_RS04230 at 951.822 kb on - strand, within ABZR86_RS04230 at 951.891 kb on + strand, within ABZR86_RS04230 at 951.993 kb on - strand, within ABZR86_RS04230 at 951.993 kb on - strand, within ABZR86_RS04230 at 951.993 kb on - strand, within ABZR86_RS04230 at 951.996 kb on - strand, within ABZR86_RS04230 at 951.996 kb on - strand, within ABZR86_RS04230 at 951.996 kb on - strand, within ABZR86_RS04230 at 952.000 kb on - strand, within ABZR86_RS04230 at 952.000 kb on - strand, within ABZR86_RS04230 at 952.000 kb on - strand, within ABZR86_RS04230 at 952.012 kb on + strand, within ABZR86_RS04230 at 952.097 kb on + strand, within ABZR86_RS04230 at 952.097 kb on + strand, within ABZR86_RS04230 at 952.411 kb on + strand, within ABZR86_RS04230 at 952.411 kb on + strand, within ABZR86_RS04230 at 952.411 kb on + strand, within ABZR86_RS04230 at 952.411 kb on + strand, within ABZR86_RS04230 at 952.412 kb on - strand, within ABZR86_RS04230 at 952.412 kb on - strand, within ABZR86_RS04230 at 952.429 kb on - strand, within ABZR86_RS04230 at 952.429 kb on - strand, within ABZR86_RS04230 at 952.609 kb on + strand at 952.609 kb on + strand at 952.609 kb on + strand at 952.700 kb on + strand, within ABZR86_RS04235 at 952.700 kb on + strand, within ABZR86_RS04235 at 952.700 kb on + strand, within ABZR86_RS04235 at 952.701 kb on - strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.707 kb on + strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.708 kb on - strand, within ABZR86_RS04235 at 952.710 kb on - strand, within ABZR86_RS04235 at 952.710 kb on - strand, within ABZR86_RS04235 at 952.710 kb on - strand, within ABZR86_RS04235 at 952.710 kb on - strand, within ABZR86_RS04235 at 952.710 kb on - strand, within ABZR86_RS04235 at 952.710 kb on - strand, within ABZR86_RS04235 at 952.716 kb on - strand, within ABZR86_RS04235 at 952.716 kb on - strand, within ABZR86_RS04235 at 952.929 kb on - strand, within ABZR86_RS04235 at 952.974 kb on + strand, within ABZR86_RS04235 at 952.986 kb on + strand, within ABZR86_RS04235 at 952.986 kb on + strand, within ABZR86_RS04235 at 952.986 kb on + strand, within ABZR86_RS04235 at 952.986 kb on + strand, within ABZR86_RS04235 at 952.987 kb on - strand, within ABZR86_RS04235 at 952.987 kb on - strand, within ABZR86_RS04235 at 953.118 kb on + strand, within ABZR86_RS04235 at 953.118 kb on + strand, within ABZR86_RS04235 at 953.118 kb on + strand, within ABZR86_RS04235 at 953.119 kb on - strand, within ABZR86_RS04235 at 953.320 kb on + strand, within ABZR86_RS04235 at 953.321 kb on - strand, within ABZR86_RS04235 at 953.338 kb on + strand, within ABZR86_RS04235 at 953.339 kb on - strand, within ABZR86_RS04235 at 953.462 kb on + strand at 953.463 kb on - strand at 953.463 kb on - strand at 953.473 kb on + strand at 953.474 kb on + strand at 953.474 kb on + strand at 953.475 kb on - strand at 953.582 kb on + strand at 953.582 kb on + strand at 953.583 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.08 mg/ml remove 950,101 + +1.9 950,227 + -0.3 950,227 + +0.5 950,227 + +0.6 950,228 - +0.0 950,349 + -0.3 950,395 + ABZR86_RS04225 0.21 -0.1 950,395 + ABZR86_RS04225 0.21 -0.4 950,395 + ABZR86_RS04225 0.21 -0.8 950,396 - ABZR86_RS04225 0.22 -1.8 950,407 + ABZR86_RS04225 0.27 -1.3 950,407 + ABZR86_RS04225 0.27 -1.4 950,408 - ABZR86_RS04225 0.27 -2.9 950,418 + ABZR86_RS04225 0.32 +0.8 950,418 + ABZR86_RS04225 0.32 -1.1 950,418 + ABZR86_RS04225 0.32 -0.2 950,418 + ABZR86_RS04225 0.32 -0.8 950,418 + ABZR86_RS04225 0.32 -0.3 950,418 + ABZR86_RS04225 0.32 -0.4 950,418 + ABZR86_RS04225 0.32 +1.0 950,418 + ABZR86_RS04225 0.32 -0.4 950,419 - ABZR86_RS04225 0.32 +0.1 950,419 - ABZR86_RS04225 0.32 -0.1 950,419 - ABZR86_RS04225 0.32 -0.1 950,419 - ABZR86_RS04225 0.32 +0.1 950,419 - ABZR86_RS04225 0.32 -1.2 950,419 - ABZR86_RS04225 0.32 -0.1 950,419 - ABZR86_RS04225 0.32 +0.7 950,617 + -0.3 950,617 + +0.3 950,719 - -0.4 950,740 + -0.1 950,741 - -0.1 950,743 + +0.5 950,743 + +1.2 950,743 + +0.3 950,743 + -0.7 950,743 + -0.3 950,744 - -1.2 950,744 - +0.3 950,744 - -0.1 950,765 + +1.9 950,765 + -0.8 950,766 - -0.9 950,826 + -0.8 950,826 + -0.3 950,826 + +0.4 950,826 + -0.5 950,827 - -1.3 950,878 + +0.4 950,911 - +0.5 950,911 - -0.8 950,962 + -0.4 950,963 - +0.4 951,090 + -1.0 951,090 + -0.4 951,090 + +0.1 951,090 + -1.7 951,093 + +0.0 951,093 + +0.4 951,093 + +1.3 951,093 + -0.1 951,094 - -0.2 951,094 - +0.7 951,147 + +1.8 951,184 + -0.3 951,185 - -0.0 951,409 + ABZR86_RS04230 0.22 +0.1 951,475 + ABZR86_RS04230 0.26 +0.1 951,475 + ABZR86_RS04230 0.26 +0.2 951,476 - ABZR86_RS04230 0.26 -0.0 951,498 + ABZR86_RS04230 0.28 -0.1 951,499 - ABZR86_RS04230 0.28 -0.9 951,499 - ABZR86_RS04230 0.28 -0.6 951,499 - ABZR86_RS04230 0.28 -0.7 951,504 + ABZR86_RS04230 0.28 -0.3 951,505 - ABZR86_RS04230 0.28 -1.1 951,515 + ABZR86_RS04230 0.29 -0.6 951,516 - ABZR86_RS04230 0.29 +2.1 951,516 - ABZR86_RS04230 0.29 +0.1 951,516 - ABZR86_RS04230 0.29 +0.3 951,516 - ABZR86_RS04230 0.29 +0.1 951,760 + ABZR86_RS04230 0.45 +0.2 951,761 - ABZR86_RS04230 0.45 +0.2 951,761 - ABZR86_RS04230 0.45 -0.3 951,822 - ABZR86_RS04230 0.49 -1.3 951,891 + ABZR86_RS04230 0.54 -2.4 951,993 - ABZR86_RS04230 0.61 -0.0 951,993 - ABZR86_RS04230 0.61 -0.7 951,993 - ABZR86_RS04230 0.61 -0.2 951,996 - ABZR86_RS04230 0.61 -2.8 951,996 - ABZR86_RS04230 0.61 -0.3 951,996 - ABZR86_RS04230 0.61 +0.8 952,000 - ABZR86_RS04230 0.61 +0.0 952,000 - ABZR86_RS04230 0.61 -0.8 952,000 - ABZR86_RS04230 0.61 -0.1 952,012 + ABZR86_RS04230 0.62 -0.8 952,097 + ABZR86_RS04230 0.68 -1.2 952,097 + ABZR86_RS04230 0.68 -0.6 952,411 + ABZR86_RS04230 0.88 -1.1 952,411 + ABZR86_RS04230 0.88 -0.1 952,411 + ABZR86_RS04230 0.88 -0.6 952,411 + ABZR86_RS04230 0.88 +0.0 952,412 - ABZR86_RS04230 0.89 -1.2 952,412 - ABZR86_RS04230 0.89 -1.0 952,429 - ABZR86_RS04230 0.90 +0.5 952,429 - ABZR86_RS04230 0.90 -1.5 952,609 + +1.4 952,609 + +2.2 952,609 + +0.3 952,700 + ABZR86_RS04235 0.11 -1.4 952,700 + ABZR86_RS04235 0.11 +1.1 952,700 + ABZR86_RS04235 0.11 -1.0 952,701 - ABZR86_RS04235 0.12 +0.1 952,707 + ABZR86_RS04235 0.12 -0.5 952,707 + ABZR86_RS04235 0.12 -1.0 952,707 + ABZR86_RS04235 0.12 -0.1 952,707 + ABZR86_RS04235 0.12 +0.1 952,707 + ABZR86_RS04235 0.12 -0.1 952,707 + ABZR86_RS04235 0.12 +0.0 952,707 + ABZR86_RS04235 0.12 +0.6 952,707 + ABZR86_RS04235 0.12 +0.4 952,707 + ABZR86_RS04235 0.12 +0.7 952,707 + ABZR86_RS04235 0.12 -1.4 952,707 + ABZR86_RS04235 0.12 -0.5 952,707 + ABZR86_RS04235 0.12 -0.4 952,707 + ABZR86_RS04235 0.12 +0.2 952,708 - ABZR86_RS04235 0.12 +0.4 952,708 - ABZR86_RS04235 0.12 -0.1 952,708 - ABZR86_RS04235 0.12 +0.2 952,708 - ABZR86_RS04235 0.12 +0.4 952,708 - ABZR86_RS04235 0.12 -0.0 952,708 - ABZR86_RS04235 0.12 -0.8 952,708 - ABZR86_RS04235 0.12 -1.0 952,708 - ABZR86_RS04235 0.12 +0.2 952,708 - ABZR86_RS04235 0.12 -0.1 952,708 - ABZR86_RS04235 0.12 +0.4 952,708 - ABZR86_RS04235 0.12 +0.1 952,708 - ABZR86_RS04235 0.12 -0.4 952,708 - ABZR86_RS04235 0.12 +0.8 952,708 - ABZR86_RS04235 0.12 -0.6 952,708 - ABZR86_RS04235 0.12 +0.7 952,708 - ABZR86_RS04235 0.12 +0.1 952,710 - ABZR86_RS04235 0.13 -2.4 952,710 - ABZR86_RS04235 0.13 +0.2 952,710 - ABZR86_RS04235 0.13 -0.2 952,710 - ABZR86_RS04235 0.13 -0.1 952,710 - ABZR86_RS04235 0.13 +0.2 952,710 - ABZR86_RS04235 0.13 -0.5 952,716 - ABZR86_RS04235 0.13 +0.2 952,716 - ABZR86_RS04235 0.13 +0.6 952,929 - ABZR86_RS04235 0.37 +0.1 952,974 + ABZR86_RS04235 0.42 +0.8 952,986 + ABZR86_RS04235 0.43 +0.9 952,986 + ABZR86_RS04235 0.43 +0.2 952,986 + ABZR86_RS04235 0.43 +0.6 952,986 + ABZR86_RS04235 0.43 +0.2 952,987 - ABZR86_RS04235 0.44 -1.0 952,987 - ABZR86_RS04235 0.44 +0.2 953,118 + ABZR86_RS04235 0.58 -0.8 953,118 + ABZR86_RS04235 0.58 -0.2 953,118 + ABZR86_RS04235 0.58 +0.6 953,119 - ABZR86_RS04235 0.58 -1.0 953,320 + ABZR86_RS04235 0.81 -0.1 953,321 - ABZR86_RS04235 0.81 -0.7 953,338 + ABZR86_RS04235 0.83 -0.6 953,339 - ABZR86_RS04235 0.83 +0.1 953,462 + +0.5 953,463 - -0.7 953,463 - +0.2 953,473 + -0.1 953,474 + -0.2 953,474 + -0.1 953,475 - +1.1 953,582 + -0.4 953,582 + -0.7 953,583 - -0.7
Or see this region's nucleotide sequence