Experiment: Nalidixic 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01880 and ABZR86_RS01885 are separated by 120 nucleotides ABZR86_RS01885 and ABZR86_RS01890 are separated by 71 nucleotides
ABZR86_RS01880: ABZR86_RS01880 - EF-P lysine aminoacylase EpmA, at 409,543 to 410,529
_RS01880
ABZR86_RS01885: ABZR86_RS01885 - DUF5668 domain-containing protein, at 410,650 to 410,811
_RS01885
ABZR86_RS01890: ABZR86_RS01890 - aquaporin Z, at 410,883 to 411,581
_RS01890
Position (kb) 410
411 Strain fitness (log2 ratio) -2
-1
0
1
2 at 410.601 kb on + strand at 410.601 kb on + strand at 410.601 kb on + strand at 410.602 kb on - strand at 410.602 kb on - strand at 410.710 kb on - strand, within ABZR86_RS01885 at 410.873 kb on + strand at 410.911 kb on + strand at 410.912 kb on - strand at 410.912 kb on - strand at 411.032 kb on + strand, within ABZR86_RS01890 at 411.193 kb on + strand, within ABZR86_RS01890 at 411.193 kb on + strand, within ABZR86_RS01890 at 411.193 kb on + strand, within ABZR86_RS01890 at 411.194 kb on - strand, within ABZR86_RS01890 at 411.277 kb on + strand, within ABZR86_RS01890 at 411.277 kb on + strand, within ABZR86_RS01890 at 411.277 kb on + strand, within ABZR86_RS01890 at 411.278 kb on - strand, within ABZR86_RS01890 at 411.278 kb on - strand, within ABZR86_RS01890 at 411.278 kb on - strand, within ABZR86_RS01890 at 411.278 kb on - strand, within ABZR86_RS01890 at 411.325 kb on + strand, within ABZR86_RS01890 at 411.325 kb on + strand, within ABZR86_RS01890 at 411.325 kb on + strand, within ABZR86_RS01890 at 411.325 kb on + strand, within ABZR86_RS01890 at 411.326 kb on - strand, within ABZR86_RS01890 at 411.326 kb on - strand, within ABZR86_RS01890 at 411.326 kb on - strand, within ABZR86_RS01890 at 411.421 kb on + strand, within ABZR86_RS01890 at 411.421 kb on + strand, within ABZR86_RS01890 at 411.422 kb on - strand, within ABZR86_RS01890 at 411.422 kb on - strand, within ABZR86_RS01890 at 411.675 kb on + strand at 411.675 kb on + strand at 411.712 kb on + strand at 411.712 kb on + strand at 411.712 kb on + strand at 411.712 kb on + strand at 411.713 kb on - strand at 411.713 kb on - strand at 411.713 kb on - strand at 411.713 kb on - strand at 411.795 kb on + strand at 411.795 kb on + strand at 411.796 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.08 mg/ml remove 410,601 + +0.8 410,601 + +1.7 410,601 + -2.1 410,602 - -0.7 410,602 - +0.7 410,710 - ABZR86_RS01885 0.37 -0.5 410,873 + -0.9 410,911 + -0.4 410,912 - -0.1 410,912 - +0.0 411,032 + ABZR86_RS01890 0.21 -0.1 411,193 + ABZR86_RS01890 0.44 -0.5 411,193 + ABZR86_RS01890 0.44 -0.6 411,193 + ABZR86_RS01890 0.44 +0.0 411,194 - ABZR86_RS01890 0.44 -0.7 411,277 + ABZR86_RS01890 0.56 -0.3 411,277 + ABZR86_RS01890 0.56 +0.7 411,277 + ABZR86_RS01890 0.56 +0.2 411,278 - ABZR86_RS01890 0.57 +1.3 411,278 - ABZR86_RS01890 0.57 -0.7 411,278 - ABZR86_RS01890 0.57 -0.2 411,278 - ABZR86_RS01890 0.57 -1.0 411,325 + ABZR86_RS01890 0.63 -0.5 411,325 + ABZR86_RS01890 0.63 -0.1 411,325 + ABZR86_RS01890 0.63 +0.8 411,325 + ABZR86_RS01890 0.63 -0.3 411,326 - ABZR86_RS01890 0.63 +0.2 411,326 - ABZR86_RS01890 0.63 -2.0 411,326 - ABZR86_RS01890 0.63 +2.7 411,421 + ABZR86_RS01890 0.77 -0.7 411,421 + ABZR86_RS01890 0.77 -1.6 411,422 - ABZR86_RS01890 0.77 +0.2 411,422 - ABZR86_RS01890 0.77 +0.1 411,675 + -0.4 411,675 + -0.7 411,712 + +0.3 411,712 + -1.4 411,712 + -0.6 411,712 + +0.0 411,713 - -0.5 411,713 - -0.4 411,713 - -0.9 411,713 - +0.1 411,795 + +0.7 411,795 + -0.9 411,796 - +1.4
Or see this region's nucleotide sequence