Strain Fitness in Sinorhizobium meliloti 1021 around SMc04003
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,998,491 | - | SMc04002 | 0.82 | +1.3 | |
2,998,768 | + | +2.3 | |||
2,998,768 | + | +2.1 | |||
2,998,768 | + | +1.3 | |||
2,998,934 | + | SMc04003 | 0.62 | +1.9 | |
2,998,935 | - | SMc04003 | 0.63 | +2.7 | |
2,999,039 | + | +1.0 | |||
2,999,505 | + | SMc04004 | 0.57 | -0.5 | |
2,999,506 | - | SMc04004 | 0.57 | -1.3 | |
2,999,578 | + | SMc04004 | 0.68 | -0.0 | |
2,999,578 | + | SMc04004 | 0.68 | -1.0 | |
2,999,579 | - | SMc04004 | 0.69 | +0.8 | |
2,999,665 | + | SMc04004 | 0.83 | +0.4 | |
2,999,700 | + | SMc04004 | 0.88 | -0.1 | |
2,999,700 | + | SMc04004 | 0.88 | -1.1 | |
2,999,701 | - | SMc04004 | 0.88 | +0.6 | |
2,999,701 | - | SMc04004 | 0.88 | -0.5 | |
2,999,701 | - | SMc04004 | 0.88 | -0.2 | |
2,999,896 | + | -0.3 | |||
2,999,897 | - | +0.4 |
Or see this region's nucleotide sequence