Strain Fitness in Sinorhizobium meliloti 1021 around SMc03178

Experiment: Paraquat dichloride 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.2 mg/ml
3,140,130	-		SMc03177	0.58	-0.8
3,140,130	-		SMc03177	0.58	-0.1
3,140,130	-		SMc03177	0.58	-0.9
3,140,345	+		SMc03177	0.72	-0.2
3,140,345	+		SMc03177	0.72	-0.1
3,140,346	-		SMc03177	0.72	-0.4
3,140,348	-		SMc03177	0.72	-0.2
3,140,348	-		SMc03177	0.72	-0.1
3,140,348	-		SMc03177	0.72	-0.8
3,140,402	-		SMc03177	0.75	+0.5
3,140,402	-		SMc03177	0.75	+0.3
3,140,420	+		SMc03177	0.76	+1.5
3,140,420	+		SMc03177	0.76	-0.5
3,140,420	+		SMc03177	0.76	-0.5
3,140,421	-		SMc03177	0.76	+0.6
3,140,453	+		SMc03177	0.78	-1.8
3,140,457	-		SMc03177	0.79	+1.3
3,140,528	+		SMc03177	0.83	-2.1
3,140,529	-		SMc03177	0.83	+0.1
3,140,529	-		SMc03177	0.83	-0.9
3,140,529	-		SMc03177	0.83	-0.8
3,140,584	+		SMc03177	0.87	-0.5
3,140,584	+		SMc03177	0.87	-1.3
3,140,584	+		SMc03177	0.87	+0.8
3,140,584	+		SMc03177	0.87	-0.4
3,140,584	+		SMc03177	0.87	-0.0
3,140,807	+				-0.7
3,140,807	+				-1.6
3,140,807	+				-1.9
3,140,808	-				-0.6
3,140,811	-				+0.7
3,140,811	-				+0.3
3,140,811	-				+0.4
3,140,830	+				-1.8
3,140,831	-				+1.4
3,140,831	-				+0.1
3,141,147	-				+0.3
3,141,147	-				+0.3
3,141,227	+		SMc03178	0.11	-1.1
3,141,337	-		SMc03178	0.15	+0.2
3,141,337	-		SMc03178	0.15	-0.2
3,141,658	+		SMc03178	0.27	-0.1
3,141,659	-		SMc03178	0.27	-0.2
3,141,659	-		SMc03178	0.27	+0.2
3,141,910	+		SMc03178	0.37	-0.9
3,141,911	-		SMc03178	0.37	+0.5
3,141,969	+		SMc03178	0.39	+0.4
3,141,970	-		SMc03178	0.39	-1.5
3,141,970	-		SMc03178	0.39	+2.1
3,141,970	-		SMc03178	0.39	+0.3
3,142,000	-		SMc03178	0.40	-0.0
3,142,086	+		SMc03178	0.43	+1.1
3,142,086	+		SMc03178	0.43	-0.5
3,142,086	+		SMc03178	0.43	+1.3
3,142,087	-		SMc03178	0.43	-0.0
3,142,155	+		SMc03178	0.46	-0.9
3,142,156	-		SMc03178	0.46	+0.7
3,142,156	-		SMc03178	0.46	+0.5
3,142,737	-		SMc03178	0.68	+0.8
3,142,747	-		SMc03178	0.68	+1.2
3,142,787	+		SMc03178	0.70	+0.2
3,142,875	+		SMc03178	0.73	+0.6
3,143,055	+		SMc03178	0.80	+0.5
3,143,056	-		SMc03178	0.80	-0.2
3,143,079	+		SMc03178	0.81	+0.9
3,143,079	+		SMc03178	0.81	+0.6
3,143,079	+		SMc03178	0.81	+0.4
3,143,079	+		SMc03178	0.81	+0.5
3,143,079	+		SMc03178	0.81	+1.9
3,143,080	-		SMc03178	0.81	-0.6
3,143,080	-		SMc03178	0.81	+0.1
3,143,080	-		SMc03178	0.81	+0.9
3,143,080	-		SMc03178	0.81	+0.6
3,143,080	-		SMc03178	0.81	-0.9
3,143,080	-		SMc03178	0.81	-2.5
3,143,080	-		SMc03178	0.81	+0.3
3,143,345	-				+0.3
3,143,366	+				-1.2
3,143,366	+				+0.1
3,143,366	+				+0.3
3,143,366	+				-0.4
3,143,514	+				-0.6
3,143,627	+				+0.2
3,143,627	+				+0.9
3,143,627	+				+0.8
3,143,628	-				+0.5
3,143,648	+				-1.3
3,143,648	+				+0.5
3,143,648	+				+0.1
3,143,648	+				+0.1
3,143,673	+				-2.3
3,143,674	-				-2.4
3,143,674	-				-1.1
3,143,778	+				-0.4
3,143,898	+				-2.9
3,144,098	+		SMc03179	0.12	-1.7
3,144,108	-		SMc03179	0.13	-0.6
3,144,110	+		SMc03179	0.13	-2.4
3,144,110	+		SMc03179	0.13	-0.8
3,144,110	+		SMc03179	0.13	-2.4
3,144,111	-		SMc03179	0.13	-0.8
3,144,111	-		SMc03179	0.13	-1.8
3,144,111	-		SMc03179	0.13	-1.1
3,144,111	-		SMc03179	0.13	-1.9
3,144,111	-		SMc03179	0.13	-0.4
3,144,111	-		SMc03179	0.13	-2.8
3,144,112	+		SMc03179	0.13	-0.2
3,144,113	-		SMc03179	0.13	-4.3
3,144,377	+		SMc03179	0.22	-1.3
3,144,377	+		SMc03179	0.22	-1.9
3,144,378	-		SMc03179	0.22	-1.7
3,144,543	-		SMc03179	0.27	-0.9
3,144,543	-		SMc03179	0.27	-2.1