Strain Fitness in Sinorhizobium meliloti 1021 around SMc02473

Experiment: Paraquat dichloride 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.2 mg/ml
3,322,455	+		SMc02474	0.10	+0.3
3,322,455	+		SMc02474	0.10	-0.8
3,322,850	-		SMc02474	0.47	-0.4
3,323,377	+				-0.9
3,323,377	+				-0.9
3,323,414	+				+0.9
3,323,415	-				-1.1
3,323,415	-				-0.6
3,323,415	-				-0.5
3,323,588	-		SMc02473	0.16	-0.5
3,323,614	+		SMc02473	0.19	+0.9
3,323,614	-		SMc02473	0.19	-1.5
3,323,653	+		SMc02473	0.24	+0.4
3,323,653	+		SMc02473	0.24	-1.9
3,323,653	+		SMc02473	0.24	-1.5
3,323,653	+		SMc02473	0.24	+0.0
3,323,653	+		SMc02473	0.24	-2.4
3,323,654	-		SMc02473	0.24	+0.4
3,323,654	-		SMc02473	0.24	-0.1
3,323,666	+		SMc02473	0.25	-0.6
3,323,666	+		SMc02473	0.25	-1.2
3,323,667	-		SMc02473	0.25	-4.4
3,323,746	+		SMc02473	0.35	+0.2
3,323,869	+		SMc02473	0.49	+0.1
3,323,870	-		SMc02473	0.49	-0.1
3,323,956	+		SMc02473	0.59	+0.0
3,323,957	-		SMc02473	0.60	-0.0
3,324,112	+		SMc02473	0.78	-0.7
3,324,244	+				-2.6
3,324,244	+				-1.4
3,324,244	+				+1.1
3,324,244	+				+0.4
3,324,244	+				+1.6
3,324,244	+				+0.1
3,324,245	-				+2.3
3,324,250	+				+1.5
3,324,251	-				-0.7
3,324,251	-				+1.0
3,324,311	-				+1.4
3,324,321	-				-0.5
3,324,405	-		SMc02472	0.12	+1.2
3,324,405	-		SMc02472	0.12	-0.6
3,324,410	+		SMc02472	0.13	-0.2
3,324,411	-		SMc02472	0.13	-1.3
3,324,411	-		SMc02472	0.13	-0.0
3,324,662	+		SMc02472	0.39	+0.2
3,324,693	-		SMc02472	0.43	+1.2
3,324,770	+		SMc02472	0.51	-0.2
3,324,771	-		SMc02472	0.51	-0.6
3,324,827	+		SMc02472	0.57	-0.6
3,324,827	+		SMc02472	0.57	+4.7
3,324,827	+		SMc02472	0.57	-0.2
3,324,828	-		SMc02472	0.57	-2.4
3,324,828	-		SMc02472	0.57	+0.5
3,324,828	-		SMc02472	0.57	+0.1
3,325,047	-		SMc02472	0.80	+0.2