Strain Fitness in Sinorhizobium meliloti 1021 around SMc01961

Experiment: Paraquat dichloride 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.2 mg/ml
2,682,292	+				-2.6
2,682,292	+				+0.1
2,682,292	+				-1.6
2,682,473	+				-0.9
2,682,593	-				-0.2
2,682,851	+		SMc01960	0.45	-0.8
2,682,851	+		SMc01960	0.45	-1.2
2,682,851	+		SMc01960	0.45	+0.3
2,682,851	+		SMc01960	0.45	+0.1
2,682,851	+		SMc01960	0.45	+0.8
2,682,852	-		SMc01960	0.45	-1.1
2,682,852	-		SMc01960	0.45	+0.6
2,682,918	+		SMc01960	0.57	-0.2
2,682,919	-		SMc01960	0.57	-0.6
2,683,020	+		SMc01960	0.75	-1.3
2,683,022	+		SMc01960	0.75	+0.4
2,683,022	+		SMc01960	0.75	-1.2
2,683,449	+		SMc01961	0.17	+0.8
2,683,464	+		SMc01961	0.18	-0.1
2,683,464	+		SMc01961	0.18	+0.6
2,683,465	-		SMc01961	0.18	+0.3
2,683,692	+		SMc01961	0.42	-0.8
2,684,094	+		SMc01961	0.84	+0.7
2,684,095	-		SMc01961	0.84	-0.4
2,684,106	+		SMc01961	0.86	-2.5
2,684,106	+		SMc01961	0.86	-2.2
2,684,106	+		SMc01961	0.86	+1.2
2,684,106	+		SMc01961	0.86	+0.5
2,684,107	-		SMc01961	0.86	+0.3
2,684,107	-		SMc01961	0.86	+1.3
2,684,107	-		SMc01961	0.86	-0.6
2,684,107	-		SMc01961	0.86	+1.5
2,684,169	+				+0.7
2,684,170	-				-0.6
2,684,221	+				-0.5
2,684,221	+				-1.2
2,684,222	-				+1.0
2,684,253	+				-1.0
2,684,253	+				-0.8
2,684,260	+				-0.3
2,684,261	-				-0.2
2,684,427	+				-0.4
2,684,428	-				-0.4
2,684,428	-				-0.8
2,684,432	-				-0.2
2,684,432	-				+0.2
2,684,593	-		SMc01962	0.24	-0.9
2,684,593	-		SMc01962	0.24	-0.3
2,684,593	-		SMc01962	0.24	+0.6
2,684,593	-		SMc01962	0.24	-0.1
2,684,749	-		SMc01962	0.44	+1.4
2,684,749	-		SMc01962	0.44	-0.4
2,684,749	-		SMc01962	0.44	-0.2
2,684,842	-		SMc01962	0.56	+0.1
2,684,904	+		SMc01962	0.64	-0.6