Strain Fitness in Sinorhizobium meliloti 1021 around SMc00728
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,850,577 | + | +1.1 | |||
2,850,651 | + | +1.7 | |||
2,852,539 | + | +0.8 | |||
2,852,708 | + | +1.5 | |||
2,852,708 | + | +1.1 | |||
2,852,709 | - | +0.4 | |||
2,852,709 | - | +1.2 | |||
2,852,710 | + | +1.1 | |||
2,852,711 | - | +1.3 | |||
2,852,711 | - | +1.5 | |||
2,852,724 | - | SMc00727 | 0.10 | +0.4 | |
2,852,930 | + | SMc00727 | 0.34 | +1.0 | |
2,852,965 | + | SMc00727 | 0.38 | +1.5 | |
2,852,965 | + | SMc00727 | 0.38 | +1.2 | |
2,852,965 | + | SMc00727 | 0.38 | +0.9 | |
2,852,965 | + | SMc00727 | 0.38 | +1.4 | |
2,853,090 | + | SMc00727 | 0.52 | +1.2 | |
2,853,091 | - | SMc00727 | 0.52 | +1.1 | |
2,853,234 | - | SMc00727 | 0.69 | +0.6 | |
2,853,242 | + | SMc00727 | 0.70 | +0.4 | |
2,853,242 | + | SMc00727 | 0.70 | -1.0 | |
2,853,242 | + | SMc00727 | 0.70 | +0.5 | |
2,853,243 | - | SMc00727 | 0.70 | +0.9 | |
2,853,285 | - | SMc00727 | 0.75 | +1.6 | |
2,853,395 | + | SMc00727 | 0.87 | -0.0 | |
2,853,396 | - | SMc00727 | 0.87 | +0.8 | |
2,853,396 | - | SMc00727 | 0.87 | +0.4 | |
2,853,422 | + | +1.4 | |||
2,853,423 | - | -0.0 | |||
2,853,467 | + | -1.0 | |||
2,853,467 | + | +1.2 | |||
2,853,468 | - | +1.7 | |||
2,853,468 | - | +1.6 | |||
2,853,468 | - | +1.5 |
Or see this region's nucleotide sequence