Strain Fitness in Sinorhizobium meliloti 1021 around SMc00080
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,012,688 | + | +0.7 | |||
1,012,689 | - | -0.1 | |||
1,012,689 | - | -0.6 | |||
1,012,773 | - | -0.6 | |||
1,013,072 | + | SMc00079 | 0.43 | +0.5 | |
1,013,072 | + | SMc00079 | 0.43 | +0.8 | |
1,013,072 | + | SMc00079 | 0.43 | +0.4 | |
1,013,073 | - | SMc00079 | 0.43 | -3.6 | |
1,013,467 | - | -0.2 | |||
1,013,546 | - | +0.4 | |||
1,013,547 | + | +0.3 | |||
1,013,547 | + | -0.5 | |||
1,013,547 | + | +0.0 | |||
1,013,547 | + | -0.5 | |||
1,013,548 | - | -1.5 | |||
1,013,637 | - | -1.5 | |||
1,013,995 | - | SMc00080 | 0.50 | +0.5 | |
1,013,995 | - | SMc00080 | 0.50 | +1.0 | |
1,014,120 | + | SMc00080 | 0.69 | +0.2 | |
1,014,314 | + | -0.5 | |||
1,014,314 | + | +1.0 | |||
1,014,315 | - | +0.2 | |||
1,014,315 | - | +2.4 | |||
1,014,315 | - | -0.3 |
Or see this region's nucleotide sequence