Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1367 and SMa1368 are separated by 7 nucleotides SMa1368 and SMa1370 overlap by 1 nucleotides SMa1370 and SMa1371 overlap by 4 nucleotides SMa1371 and SMa1374 are separated by 2 nucleotides
SMa1367: SMa1367 - short chain alcohol dehydrogenase-related dehydrogenase, at 751,181 to 751,939
SMa1367
SMa1368: SMa1368 - hypothetical protein, at 751,947 to 752,672
SMa1368
SMa1370: SMa1370 - ABC transporter ATP-binding protein, at 752,672 to 753,655
SMa1370
SMa1371: SMa1371 - ABC transporter ATP-binding protein, at 753,652 to 754,632
SMa1371
SMa1374: SMa1374 - ABC transporter permease, at 754,635 to 755,594
SMa1374
Position (kb) 752
753
754 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 751.814 kb on + strand, within SMa1367 at 752.222 kb on + strand, within SMa1368 at 752.222 kb on + strand, within SMa1368 at 752.388 kb on + strand, within SMa1368 at 752.388 kb on + strand, within SMa1368 at 752.489 kb on + strand, within SMa1368 at 752.896 kb on + strand, within SMa1370 at 752.897 kb on - strand, within SMa1370 at 752.898 kb on + strand, within SMa1370 at 752.899 kb on - strand, within SMa1370 at 752.899 kb on - strand, within SMa1370 at 752.908 kb on + strand, within SMa1370 at 752.908 kb on + strand, within SMa1370 at 752.919 kb on + strand, within SMa1370 at 752.920 kb on - strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 752.961 kb on + strand, within SMa1370 at 753.024 kb on + strand, within SMa1370 at 753.025 kb on - strand, within SMa1370 at 753.025 kb on - strand, within SMa1370 at 753.030 kb on - strand, within SMa1370 at 753.059 kb on - strand, within SMa1370 at 753.343 kb on + strand, within SMa1370 at 753.345 kb on + strand, within SMa1370 at 753.346 kb on - strand, within SMa1370 at 753.413 kb on - strand, within SMa1370 at 753.609 kb on + strand at 753.610 kb on - strand at 753.656 kb on - strand at 753.820 kb on + strand, within SMa1371 at 753.884 kb on + strand, within SMa1371 at 753.885 kb on - strand, within SMa1371 at 753.947 kb on + strand, within SMa1371 at 753.947 kb on + strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 754.072 kb on + strand, within SMa1371 at 754.073 kb on - strand, within SMa1371
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 751,814 + SMa1367 0.83 +0.1 752,222 + SMa1368 0.38 +0.1 752,222 + SMa1368 0.38 -1.3 752,388 + SMa1368 0.61 +1.1 752,388 + SMa1368 0.61 +0.6 752,489 + SMa1368 0.75 -0.4 752,896 + SMa1370 0.23 -0.2 752,897 - SMa1370 0.23 -0.2 752,898 + SMa1370 0.23 -3.6 752,899 - SMa1370 0.23 +0.8 752,899 - SMa1370 0.23 -1.3 752,908 + SMa1370 0.24 -1.1 752,908 + SMa1370 0.24 -1.2 752,919 + SMa1370 0.25 -0.8 752,920 - SMa1370 0.25 -3.4 752,961 + SMa1370 0.29 -0.9 752,961 + SMa1370 0.29 -2.4 752,961 + SMa1370 0.29 +1.1 752,961 + SMa1370 0.29 +0.8 752,961 + SMa1370 0.29 -0.5 753,024 + SMa1370 0.36 +0.2 753,025 - SMa1370 0.36 +0.9 753,025 - SMa1370 0.36 -2.3 753,030 - SMa1370 0.36 -1.4 753,059 - SMa1370 0.39 -1.0 753,343 + SMa1370 0.68 -0.3 753,345 + SMa1370 0.68 +0.1 753,346 - SMa1370 0.68 -1.0 753,413 - SMa1370 0.75 +1.7 753,609 + -0.1 753,610 - -0.3 753,656 - -0.5 753,820 + SMa1371 0.17 +0.1 753,884 + SMa1371 0.24 +1.3 753,885 - SMa1371 0.24 -0.3 753,947 + SMa1371 0.30 -0.1 753,947 + SMa1371 0.30 -0.5 753,948 - SMa1371 0.30 +1.1 753,948 - SMa1371 0.30 -1.2 753,948 - SMa1371 0.30 -2.2 753,948 - SMa1371 0.30 -0.3 753,948 - SMa1371 0.30 -2.5 753,948 - SMa1371 0.30 +0.2 754,072 + SMa1371 0.43 +0.5 754,073 - SMa1371 0.43 -0.9
Or see this region's nucleotide sequence