Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0855 and SMa0857 overlap by 1 nucleotides SMa0857 and SMa0861 are separated by 370 nucleotides
SMa0855: SMa0855 - sulfate adenylyltransferase subunit 2, at 472,764 to 473,663
SMa0855
SMa0857: SMa0857 - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase, at 473,663 to 475,588
SMa0857
SMa0861: SMa0861 - transposase, fragment, at 475,959 to 476,840
SMa0861
Position (kb)
473
474
475
476 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 472.748 kb on + strand at 472.749 kb on - strand at 472.749 kb on - strand at 474.617 kb on - strand, within SMa0857 at 474.617 kb on - strand, within SMa0857 at 474.617 kb on - strand, within SMa0857 at 474.617 kb on - strand, within SMa0857 at 475.137 kb on - strand, within SMa0857 at 475.444 kb on - strand at 475.483 kb on + strand at 475.485 kb on + strand at 475.485 kb on + strand at 475.486 kb on - strand at 475.486 kb on - strand at 475.586 kb on + strand at 475.587 kb on - strand at 475.600 kb on - strand at 475.655 kb on + strand at 475.655 kb on + strand at 475.655 kb on + strand at 475.657 kb on + strand at 475.672 kb on - strand at 475.725 kb on - strand at 475.794 kb on + strand at 475.795 kb on - strand at 475.815 kb on + strand at 475.815 kb on + strand at 475.816 kb on - strand at 475.816 kb on - strand at 475.896 kb on + strand at 475.896 kb on + strand at 475.897 kb on - strand at 476.179 kb on + strand, within SMa0861 at 476.379 kb on - strand, within SMa0861 at 476.379 kb on - strand, within SMa0861 at 476.485 kb on + strand, within SMa0861 at 476.496 kb on + strand, within SMa0861 at 476.497 kb on - strand, within SMa0861 at 476.497 kb on - strand, within SMa0861
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 472,748 + +0.1 472,749 - -0.7 472,749 - +0.7 474,617 - SMa0857 0.50 -0.6 474,617 - SMa0857 0.50 -0.3 474,617 - SMa0857 0.50 +1.0 474,617 - SMa0857 0.50 -1.3 475,137 - SMa0857 0.77 -0.8 475,444 - -3.7 475,483 + +1.4 475,485 + -3.2 475,485 + +2.0 475,486 - -1.0 475,486 - -0.3 475,586 + -0.2 475,587 - +0.1 475,600 - -0.3 475,655 + +1.2 475,655 + -2.7 475,655 + +0.0 475,657 + -0.7 475,672 - +0.7 475,725 - +0.3 475,794 + -2.3 475,795 - +0.3 475,815 + +0.4 475,815 + +0.1 475,816 - +0.5 475,816 - +0.0 475,896 + -0.2 475,896 + -2.5 475,897 - +1.0 476,179 + SMa0861 0.25 +1.3 476,379 - SMa0861 0.48 -0.7 476,379 - SMa0861 0.48 -0.5 476,485 + SMa0861 0.60 -0.3 476,496 + SMa0861 0.61 -0.1 476,497 - SMa0861 0.61 +0.7 476,497 - SMa0861 0.61 +0.2
Or see this region's nucleotide sequence