Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0791 and SMa0792 are separated by 18 nucleotides SMa0792 and SMa0793 overlap by 4 nucleotides SMa0793 and SMa0794 overlap by 4 nucleotides
SMa0791: SMa0791 - hypothetical protein, at 430,599 to 431,201
SMa0791
SMa0792: SMa0792 - hypothetical protein, at 431,220 to 432,053
SMa0792
SMa0793: SMa0793 - hypothetical protein, at 432,050 to 432,985
SMa0793
SMa0794: SMa0794 - Monoxygenase, at 432,982 to 434,022
SMa0794
Position (kb)
431
432
433 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 430.598 kb on + strand at 430.598 kb on + strand at 430.598 kb on + strand at 430.599 kb on - strand at 430.679 kb on - strand, within SMa0791 at 430.679 kb on - strand, within SMa0791 at 430.789 kb on + strand, within SMa0791 at 430.790 kb on - strand, within SMa0791 at 430.793 kb on + strand, within SMa0791 at 430.793 kb on + strand, within SMa0791 at 430.901 kb on + strand, within SMa0791 at 430.924 kb on - strand at 430.950 kb on + strand, within SMa0791 at 430.951 kb on - strand, within SMa0791 at 430.968 kb on - strand, within SMa0791 at 431.041 kb on - strand, within SMa0791 at 431.232 kb on - strand at 431.232 kb on - strand at 431.298 kb on + strand at 431.326 kb on + strand, within SMa0792 at 431.327 kb on - strand, within SMa0792 at 431.327 kb on - strand, within SMa0792 at 431.356 kb on + strand, within SMa0792 at 431.414 kb on - strand, within SMa0792 at 431.414 kb on - strand, within SMa0792 at 431.605 kb on - strand, within SMa0792 at 431.605 kb on - strand, within SMa0792 at 431.791 kb on - strand, within SMa0792 at 431.791 kb on - strand, within SMa0792 at 431.832 kb on + strand, within SMa0792 at 431.833 kb on - strand, within SMa0792 at 431.833 kb on - strand, within SMa0792 at 431.975 kb on + strand at 431.975 kb on + strand at 431.976 kb on - strand at 431.976 kb on - strand at 431.976 kb on - strand at 431.976 kb on - strand at 431.976 kb on - strand at 431.986 kb on + strand at 431.987 kb on - strand at 432.160 kb on + strand, within SMa0793 at 432.175 kb on + strand, within SMa0793 at 432.176 kb on - strand, within SMa0793 at 432.176 kb on - strand, within SMa0793 at 432.236 kb on + strand, within SMa0793 at 432.451 kb on - strand, within SMa0793 at 432.451 kb on - strand, within SMa0793 at 432.451 kb on - strand, within SMa0793 at 432.606 kb on + strand, within SMa0793 at 432.741 kb on - strand, within SMa0793 at 432.874 kb on + strand, within SMa0793 at 432.875 kb on - strand, within SMa0793 at 432.923 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 430,598 + -1.1 430,598 + -0.1 430,598 + -1.6 430,599 - +0.6 430,679 - SMa0791 0.13 -0.7 430,679 - SMa0791 0.13 -0.6 430,789 + SMa0791 0.32 +1.2 430,790 - SMa0791 0.32 -0.1 430,793 + SMa0791 0.32 +1.3 430,793 + SMa0791 0.32 +0.4 430,901 + SMa0791 0.50 +0.1 430,924 - -1.3 430,950 + SMa0791 0.58 +0.4 430,951 - SMa0791 0.58 -0.1 430,968 - SMa0791 0.61 -1.1 431,041 - SMa0791 0.73 -0.3 431,232 - +0.3 431,232 - +0.4 431,298 + -1.3 431,326 + SMa0792 0.13 +1.0 431,327 - SMa0792 0.13 -1.3 431,327 - SMa0792 0.13 -0.7 431,356 + SMa0792 0.16 -0.6 431,414 - SMa0792 0.23 -0.3 431,414 - SMa0792 0.23 +0.1 431,605 - SMa0792 0.46 -0.6 431,605 - SMa0792 0.46 -0.8 431,791 - SMa0792 0.68 +0.1 431,791 - SMa0792 0.68 -1.4 431,832 + SMa0792 0.73 -3.0 431,833 - SMa0792 0.74 -0.7 431,833 - SMa0792 0.74 -0.0 431,975 + -0.6 431,975 + -0.8 431,976 - -1.3 431,976 - -0.5 431,976 - +1.7 431,976 - -0.4 431,976 - +0.4 431,986 + +1.0 431,987 - -0.9 432,160 + SMa0793 0.12 -1.0 432,175 + SMa0793 0.13 -0.0 432,176 - SMa0793 0.13 +1.2 432,176 - SMa0793 0.13 -0.2 432,236 + SMa0793 0.20 -2.9 432,451 - SMa0793 0.43 -2.1 432,451 - SMa0793 0.43 -0.1 432,451 - SMa0793 0.43 -0.0 432,606 + SMa0793 0.59 -0.2 432,741 - SMa0793 0.74 +0.4 432,874 + SMa0793 0.88 -1.4 432,875 - SMa0793 0.88 +0.8 432,923 + +0.1
Or see this region's nucleotide sequence