Strain Fitness in Sinorhizobium meliloti 1021 around SMa0091
Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
46,259 | - | SMa0087 | 0.57 | -0.5 | |
46,259 | - | SMa0087 | 0.57 | +2.0 | |
46,259 | - | SMa0087 | 0.57 | -1.6 | |
46,451 | - | -1.4 | |||
46,567 | + | -0.8 | |||
46,572 | - | -1.2 | |||
46,576 | + | +0.1 | |||
46,880 | + | SMa0089 | 0.47 | -0.8 | |
46,881 | - | SMa0089 | 0.47 | -1.3 | |
46,920 | + | SMa0089 | 0.57 | -0.4 | |
46,920 | + | SMa0089 | 0.57 | -0.4 | |
46,920 | + | SMa0089 | 0.57 | +2.7 | |
46,921 | - | SMa0089 | 0.57 | -0.2 | |
46,922 | + | SMa0089 | 0.57 | +3.0 | |
46,923 | - | SMa0089 | 0.57 | +0.1 | |
46,923 | - | SMa0089 | 0.57 | -0.7 | |
47,099 | - | -0.5 | |||
47,223 | - | -1.5 | |||
47,625 | - | SMa0091 | 0.57 | -2.5 | |
47,646 | - | SMa0091 | 0.60 | +1.3 | |
47,687 | + | SMa0091 | 0.66 | -2.0 | |
47,688 | - | SMa0091 | 0.67 | -1.3 | |
47,688 | - | SMa0091 | 0.67 | -0.5 | |
47,740 | + | SMa0091 | 0.74 | +1.0 | |
47,784 | - | SMa0091 | 0.80 | -0.5 | |
47,834 | + | SMa0091 | 0.88 | -1.6 | |
47,834 | + | SMa0091 | 0.88 | +1.2 | |
47,879 | + | +0.5 | |||
47,880 | - | -1.8 | |||
47,889 | - | -1.7 | |||
47,993 | + | +0.2 | |||
47,993 | + | +0.9 | |||
48,039 | + | -1.2 | |||
48,040 | - | -1.9 | |||
48,040 | - | +0.2 | |||
48,197 | + | +0.2 | |||
48,197 | + | -0.3 | |||
48,278 | + | SMa0093 | 0.11 | +2.2 | |
48,279 | - | SMa0093 | 0.11 | +0.3 | |
48,279 | - | SMa0093 | 0.11 | +0.7 | |
48,450 | - | SMa0093 | 0.31 | -1.8 | |
48,767 | - | SMa0093 | 0.69 | -0.1 |
Or see this region's nucleotide sequence