Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21299 and SM_b21300 are separated by 94 nucleotides SM_b21300 and SM_b21301 are separated by 4 nucleotides
SM_b21299: SM_b21299 - DeoR family transcriptional regulator, at 880,615 to 881,406
_b21299
SM_b21300: SM_b21300 - deoxyribose-phosphate aldolase, at 881,501 to 882,505
_b21300
SM_b21301: SM_b21301 - ly membrane-anchored aldehyde dehydrogenase, at 882,510 to 884,894
_b21301
Position (kb) 881
882
883 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 880.509 kb on + strand at 880.510 kb on - strand at 880.510 kb on - strand at 880.706 kb on + strand, within SM_b21299 at 880.706 kb on + strand, within SM_b21299 at 880.706 kb on + strand, within SM_b21299 at 880.765 kb on + strand, within SM_b21299 at 880.937 kb on - strand, within SM_b21299 at 880.937 kb on - strand, within SM_b21299 at 880.963 kb on + strand, within SM_b21299 at 880.985 kb on - strand, within SM_b21299 at 880.985 kb on - strand, within SM_b21299 at 880.985 kb on - strand, within SM_b21299 at 881.036 kb on + strand, within SM_b21299 at 881.054 kb on - strand, within SM_b21299 at 881.230 kb on + strand, within SM_b21299 at 881.231 kb on - strand, within SM_b21299 at 881.307 kb on + strand, within SM_b21299 at 881.366 kb on - strand at 881.366 kb on - strand at 881.366 kb on - strand at 881.554 kb on + strand at 881.555 kb on - strand at 881.577 kb on + strand at 881.859 kb on - strand, within SM_b21300 at 882.275 kb on + strand, within SM_b21300 at 882.276 kb on - strand, within SM_b21300 at 882.305 kb on + strand, within SM_b21300 at 882.350 kb on + strand, within SM_b21300 at 882.351 kb on - strand, within SM_b21300 at 882.351 kb on - strand, within SM_b21300 at 882.351 kb on - strand, within SM_b21300 at 882.473 kb on + strand at 882.474 kb on - strand at 882.543 kb on + strand at 882.620 kb on - strand at 882.620 kb on - strand at 882.804 kb on + strand, within SM_b21301 at 882.905 kb on - strand, within SM_b21301 at 882.928 kb on - strand, within SM_b21301 at 882.928 kb on - strand, within SM_b21301 at 883.097 kb on + strand, within SM_b21301 at 883.217 kb on + strand, within SM_b21301
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 880,509 + -0.6 880,510 - +0.3 880,510 - +0.2 880,706 + SM_b21299 0.11 -0.2 880,706 + SM_b21299 0.11 -2.1 880,706 + SM_b21299 0.11 -2.8 880,765 + SM_b21299 0.19 +0.2 880,937 - SM_b21299 0.41 -1.3 880,937 - SM_b21299 0.41 -2.0 880,963 + SM_b21299 0.44 -1.2 880,985 - SM_b21299 0.47 -0.7 880,985 - SM_b21299 0.47 +0.0 880,985 - SM_b21299 0.47 +0.3 881,036 + SM_b21299 0.53 -0.3 881,054 - SM_b21299 0.55 +0.3 881,230 + SM_b21299 0.78 -0.6 881,231 - SM_b21299 0.78 +0.0 881,307 + SM_b21299 0.87 -0.1 881,366 - +0.5 881,366 - +0.7 881,366 - -0.2 881,554 + -1.6 881,555 - +0.4 881,577 + -1.3 881,859 - SM_b21300 0.36 +1.5 882,275 + SM_b21300 0.77 +0.7 882,276 - SM_b21300 0.77 -0.4 882,305 + SM_b21300 0.80 +0.1 882,350 + SM_b21300 0.84 -0.7 882,351 - SM_b21300 0.85 +0.8 882,351 - SM_b21300 0.85 +0.4 882,351 - SM_b21300 0.85 +0.0 882,473 + +1.1 882,474 - +0.4 882,543 + -0.3 882,620 - +1.6 882,620 - +1.1 882,804 + SM_b21301 0.12 -1.0 882,905 - SM_b21301 0.17 -0.3 882,928 - SM_b21301 0.18 -0.4 882,928 - SM_b21301 0.18 +0.1 883,097 + SM_b21301 0.25 +0.3 883,217 + SM_b21301 0.30 +0.3
Or see this region's nucleotide sequence