Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21277 and SM_b21278 overlap by 4 nucleotides
SM_b21277: SM_b21277 - inosine-uridine preferring nucleoside hydrolase, at 850,786 to 851,709
_b21277
SM_b21278: SM_b21278 - adenine deaminase, at 851,706 to 853,487
_b21278
Position (kb)
850
851
852 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 849.796 kb on + strand at 849.936 kb on + strand at 849.937 kb on - strand at 849.960 kb on + strand at 849.961 kb on - strand at 850.009 kb on + strand at 850.010 kb on - strand at 850.423 kb on + strand at 850.423 kb on + strand at 850.423 kb on + strand at 850.424 kb on - strand at 850.424 kb on - strand at 850.424 kb on - strand at 850.424 kb on - strand at 850.425 kb on + strand at 850.648 kb on + strand at 850.648 kb on + strand at 850.660 kb on - strand at 851.013 kb on + strand, within SM_b21277 at 851.014 kb on - strand, within SM_b21277 at 851.014 kb on - strand, within SM_b21277 at 851.158 kb on - strand, within SM_b21277 at 851.253 kb on + strand, within SM_b21277 at 851.253 kb on + strand, within SM_b21277 at 851.444 kb on - strand, within SM_b21277 at 851.488 kb on + strand, within SM_b21277 at 851.488 kb on + strand, within SM_b21277 at 851.488 kb on + strand, within SM_b21277 at 851.489 kb on - strand, within SM_b21277 at 851.489 kb on - strand, within SM_b21277 at 851.489 kb on - strand, within SM_b21277 at 851.635 kb on + strand at 851.636 kb on - strand at 851.636 kb on - strand at 851.649 kb on - strand at 851.713 kb on + strand at 851.972 kb on + strand, within SM_b21278 at 851.972 kb on + strand, within SM_b21278 at 851.972 kb on + strand, within SM_b21278 at 851.972 kb on + strand, within SM_b21278 at 851.972 kb on + strand, within SM_b21278 at 851.972 kb on + strand, within SM_b21278 at 851.972 kb on + strand, within SM_b21278 at 851.972 kb on + strand, within SM_b21278 at 851.972 kb on + strand, within SM_b21278 at 851.973 kb on - strand at 851.973 kb on - strand, within SM_b21278 at 851.973 kb on - strand, within SM_b21278 at 851.973 kb on - strand, within SM_b21278 at 851.973 kb on - strand, within SM_b21278 at 851.973 kb on - strand, within SM_b21278 at 852.010 kb on - strand, within SM_b21278 at 852.010 kb on - strand, within SM_b21278 at 852.521 kb on + strand, within SM_b21278 at 852.557 kb on + strand, within SM_b21278
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 849,796 + +0.3 849,936 + -0.6 849,937 - +0.0 849,960 + -0.7 849,961 - -0.0 850,009 + +0.1 850,010 - -0.4 850,423 + -0.8 850,423 + +2.8 850,423 + +0.8 850,424 - -0.5 850,424 - -0.5 850,424 - +0.5 850,424 - +0.0 850,425 + +0.1 850,648 + -2.0 850,648 + -1.0 850,660 - -0.3 851,013 + SM_b21277 0.25 -0.5 851,014 - SM_b21277 0.25 -2.0 851,014 - SM_b21277 0.25 -0.4 851,158 - SM_b21277 0.40 +0.3 851,253 + SM_b21277 0.51 +0.7 851,253 + SM_b21277 0.51 +0.4 851,444 - SM_b21277 0.71 -0.4 851,488 + SM_b21277 0.76 -0.9 851,488 + SM_b21277 0.76 +1.1 851,488 + SM_b21277 0.76 -1.9 851,489 - SM_b21277 0.76 -0.1 851,489 - SM_b21277 0.76 -0.9 851,489 - SM_b21277 0.76 -0.2 851,635 + +0.1 851,636 - -2.2 851,636 - +0.6 851,649 - -0.5 851,713 + -0.5 851,972 + SM_b21278 0.15 +1.7 851,972 + SM_b21278 0.15 -3.4 851,972 + SM_b21278 0.15 -0.3 851,972 + SM_b21278 0.15 +0.2 851,972 + SM_b21278 0.15 -0.3 851,972 + SM_b21278 0.15 +1.7 851,972 + SM_b21278 0.15 -0.3 851,972 + SM_b21278 0.15 +0.3 851,972 + SM_b21278 0.15 -0.5 851,973 - +1.0 851,973 - SM_b21278 0.15 +1.2 851,973 - SM_b21278 0.15 +1.0 851,973 - SM_b21278 0.15 +0.3 851,973 - SM_b21278 0.15 +0.5 851,973 - SM_b21278 0.15 +0.6 852,010 - SM_b21278 0.17 +0.0 852,010 - SM_b21278 0.17 -0.3 852,521 + SM_b21278 0.46 -0.7 852,557 + SM_b21278 0.48 +0.7
Or see this region's nucleotide sequence