Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_66

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
67,838	+				-1.2
67,838	+				+0.1
67,839	-				-0.6
67,839	-				-1.2
67,923	+				+0.6
67,923	+				-1.2
67,923	+				-1.3
67,924	-				-1.6
67,924	-				-0.7
67,924	-				+1.2
67,924	-				-0.9
67,924	-				-1.8
67,924	-				+1.1
67,924	-				-1.3
67,924	-				+0.4
67,927	-				+0.4
67,927	-				-0.1
68,011	-		Pf1N1B4_65	0.10	+1.4
68,011	-		Pf1N1B4_65	0.10	+0.6
68,019	+		Pf1N1B4_65	0.11	+1.4
68,019	+		Pf1N1B4_65	0.11	+2.7
68,019	+		Pf1N1B4_65	0.11	+0.4
68,020	-		Pf1N1B4_65	0.11	-1.6
68,020	-		Pf1N1B4_65	0.11	+1.1
68,020	-		Pf1N1B4_65	0.11	-1.1
68,020	-		Pf1N1B4_65	0.11	-1.6
68,122	-		Pf1N1B4_65	0.24	-1.9
68,122	-		Pf1N1B4_65	0.24	+0.8
68,232	-		Pf1N1B4_65	0.37	-1.2
68,245	+		Pf1N1B4_65	0.39	+1.4
68,246	-				+2.0
68,292	+		Pf1N1B4_65	0.44	+1.4
68,293	-		Pf1N1B4_65	0.44	-0.2
68,293	-		Pf1N1B4_65	0.44	-1.4
68,293	-		Pf1N1B4_65	0.44	-0.6
68,293	-		Pf1N1B4_65	0.44	+1.3
68,293	-		Pf1N1B4_65	0.44	+0.4
68,293	-		Pf1N1B4_65	0.44	+0.4
68,484	+		Pf1N1B4_65	0.67	+1.3
68,485	-		Pf1N1B4_65	0.67	+1.0
68,485	-		Pf1N1B4_65	0.67	+0.4
68,485	-		Pf1N1B4_65	0.67	+0.5
68,619	+		Pf1N1B4_65	0.84	+2.5
68,619	+		Pf1N1B4_65	0.84	+1.4
68,619	+				+2.0
68,620	-		Pf1N1B4_65	0.84	+2.0
68,620	-		Pf1N1B4_65	0.84	+1.0
68,698	-				+2.0
68,698	-				+0.8
68,709	+				+1.0
68,710	-				+1.8
68,871	-		Pf1N1B4_66	0.10	-1.2
69,038	+		Pf1N1B4_66	0.41	-0.8
69,045	-		Pf1N1B4_66	0.42	+0.6
69,045	-		Pf1N1B4_66	0.42	-1.2
69,045	-		Pf1N1B4_66	0.42	-0.5
69,045	-		Pf1N1B4_66	0.42	+0.8
69,045	-				-1.6
69,045	-		Pf1N1B4_66	0.42	-0.2
69,129	+		Pf1N1B4_66	0.58	-0.9
69,130	-		Pf1N1B4_66	0.58	+0.4
69,130	-		Pf1N1B4_66	0.58	-0.3
69,141	-		Pf1N1B4_66	0.60	-0.1
69,141	-		Pf1N1B4_66	0.60	+0.2
69,141	-		Pf1N1B4_66	0.60	-0.9
69,141	-		Pf1N1B4_66	0.60	+2.4
69,141	-				-1.2
69,150	+		Pf1N1B4_66	0.62	-0.5
69,207	-		Pf1N1B4_66	0.73	+0.1
69,207	-		Pf1N1B4_66	0.73	-0.5
69,271	+		Pf1N1B4_66	0.85	-1.2
69,330	+				-0.0
69,330	+				+1.2
69,395	+				+1.1
69,432	+				-0.0
69,432	+				-0.7
69,433	-				-1.0
69,433	-				+0.7
69,433	-				-0.0
69,433	-				-0.3
69,473	+				-0.3
69,474	-				-1.9
69,474	-				-0.6
69,476	-				-1.0
69,476	-				+0.4
69,639	-		Pf1N1B4_67	0.20	+0.6
69,729	+		Pf1N1B4_67	0.33	-1.5
69,798	-		Pf1N1B4_67	0.43	-0.2
70,129	+				-1.2
70,160	+				-1.6
70,161	-				+1.4