Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5917

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
357,747	+				+0.2
357,747	+				-1.0
357,748	-				-1.6
357,755	+				+1.3
357,871	-				+0.2
357,998	-				-1.3
358,033	-		Pf1N1B4_5916	0.29	-0.2
358,149	+		Pf1N1B4_5916	0.43	+1.0
358,398	+		Pf1N1B4_5916	0.74	+0.9
358,398	+		Pf1N1B4_5916	0.74	+0.6
358,399	-		Pf1N1B4_5916	0.74	-1.2
358,576	-				-1.1
358,578	+				+0.4
358,578	+				+0.2
358,655	-				-0.8
358,655	-				-2.3
358,655	-				-1.3
358,655	-				+1.1
358,655	-				+0.2
359,041	+		Pf1N1B4_5917	0.68	-0.3
359,042	-		Pf1N1B4_5917	0.68	-2.1
359,042	-		Pf1N1B4_5917	0.68	-1.3
359,042	-		Pf1N1B4_5917	0.68	+0.9
359,123	+		Pf1N1B4_5917	0.82	-1.1
359,203	+				-2.6
359,203	+				-0.8
359,325	+				+1.2
359,347	-				+0.7
359,402	+				+0.5
359,403	-				-1.3
359,403	-				-0.8
359,502	+				-2.3
359,503	-				+1.4
359,503	-				-0.6
359,522	+				+0.2
359,598	-				+0.5
359,819	+				+0.2
359,819	+				+0.0
359,819	+				-0.3
359,820	-				-1.3
359,881	-		Pf1N1B4_5918	0.12	+1.7
359,881	-		Pf1N1B4_5918	0.12	-2.3
359,924	-		Pf1N1B4_5918	0.13	+0.1