Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5439

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
183,927	+		Pf1N1B4_5438	0.63	-0.0
183,927	+		Pf1N1B4_5438	0.63	-2.1
183,927	+		Pf1N1B4_5438	0.63	-0.0
183,927	+		Pf1N1B4_5438	0.63	+0.3
183,927	+		Pf1N1B4_5438	0.63	+1.0
183,927	+		Pf1N1B4_5438	0.63	+0.8
183,927	+		Pf1N1B4_5438	0.63	+1.7
183,928	-		Pf1N1B4_5438	0.63	-1.4
183,995	+		Pf1N1B4_5438	0.89	+0.7
183,995	+		Pf1N1B4_5438	0.89	-1.2
183,995	+		Pf1N1B4_5438	0.89	-1.9
183,996	-		Pf1N1B4_5438	0.89	-1.1
183,996	-		Pf1N1B4_5438	0.89	+1.3
183,996	-		Pf1N1B4_5438	0.89	+1.2
184,119	-				+0.5
184,119	-				+0.1
184,161	+				+0.8
184,162	-				+0.6
184,162	-				-1.4
184,162	-				+0.7
184,174	+				+1.5
184,340	+				+0.7
184,340	+				+1.1
184,341	-				-0.6
184,341	-				+0.1
184,357	+				-0.7
184,357	+				-0.5
184,358	-				-0.3
184,506	+				+0.6
184,507	-				+0.1
184,507	-				+0.7
184,557	+				-0.9
184,558	-				-1.7
184,558	-				-0.2
184,558	-				-1.5
184,679	+				+0.7
184,719	-				-0.3
184,719	-				-0.7
184,739	+				-0.4
184,739	+				+0.5
184,740	-				-1.4
184,889	+		Pf1N1B4_5439	0.12	-1.0
184,918	+		Pf1N1B4_5439	0.22	-0.6
184,918	+		Pf1N1B4_5439	0.22	-0.3
185,006	-		Pf1N1B4_5439	0.52	-1.9
185,006	-		Pf1N1B4_5439	0.52	+0.4
185,019	-		Pf1N1B4_5439	0.56	-1.9
185,076	-		Pf1N1B4_5439	0.76	-2.2
185,144	-				+0.7
185,144	-				+1.1
185,144	-				+1.6
185,144	-				-0.5
185,168	+				-0.3
185,168	+				+0.7
185,168	+				-0.0
185,169	-				-1.6
185,223	-				+0.3
185,223	-				+0.2
185,223	-				+1.1
185,234	+				+0.1
185,235	-				-0.6
185,249	-				-0.5
185,249	-				-0.3
185,252	+				+0.5
185,252	+				+0.9
185,252	+				+1.3
185,253	-				-0.6
185,253	-				+1.5
185,291	+				+0.7
185,292	-				-1.3
185,326	+				+0.1
185,327	-				-0.3
185,327	-				-0.7
185,422	+				+0.7
185,422	+				-0.6
185,422	+				-0.3
185,422	+				-0.1
185,423	-				+0.6
185,423	-				-2.3
185,423	-				-0.8
185,423	-				-0.7
185,427	-				+1.1
185,427	-				-1.3
185,454	-				+0.3
185,454	-				+0.7
185,491	+				-1.3
185,491	+				-1.6
185,491	+				+0.1
185,512	+				+0.1
185,517	+				-2.9
185,517	+				+1.7
185,517	+				+1.0
185,517	+				-1.1
185,517	+				-0.0
185,517	+				+0.3
185,517	+				+0.0
185,518	-				-0.6
185,518	-				-0.3
185,518	-				+1.1
185,518	-				-0.9
185,518	-				-0.5
185,518	-				-0.1
185,518	-				-1.6
185,523	+				+1.0
185,523	+				-0.4
185,523	+				-0.6
185,524	-				-0.6
185,524	-				+0.5
185,524	-				+0.1
185,524	-				-1.4
185,524	-				+0.3
185,683	-				+0.2
185,729	+				-0.0
185,729	+				+0.9
185,729	+				-1.6
185,777	+				-0.6
185,777	+				+0.7
185,777	+				-0.1
185,777	+				+0.1
185,777	+				+1.7
185,778	-				-0.3
185,778	-				+0.1
185,778	-				+0.1
185,778	-				-0.3
185,814	-				-0.6
186,017	+				+0.5
186,017	+				+1.3
186,018	-				+1.7
186,018	-				+1.8
186,042	-				-1.9
186,042	-				-0.1