Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4381

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
4,838,065	+		Pf1N1B4_4380	0.21	+0.3
4,838,137	+				+1.8
4,838,137	+				-0.8
4,838,179	+				-0.8
4,838,179	+		Pf1N1B4_4380	0.31	-0.3
4,838,179	+		Pf1N1B4_4380	0.31	+0.9
4,838,180	-				+1.2
4,838,327	-		Pf1N1B4_4380	0.45	-0.2
4,838,649	+		Pf1N1B4_4380	0.75	-2.0
4,838,650	-				+0.2
4,838,650	-		Pf1N1B4_4380	0.75	-0.3
4,838,708	+		Pf1N1B4_4380	0.81	-2.0
4,838,716	+		Pf1N1B4_4380	0.82	+0.5
4,838,789	-		Pf1N1B4_4380	0.88	+0.4
4,838,789	-		Pf1N1B4_4380	0.88	+0.2
4,838,789	-		Pf1N1B4_4380	0.88	+2.1
4,838,789	-		Pf1N1B4_4380	0.88	-0.4
4,838,873	+				-0.2
4,839,330	+		Pf1N1B4_4381	0.36	+0.2
4,839,330	+		Pf1N1B4_4381	0.36	-1.4
4,839,330	+		Pf1N1B4_4381	0.36	-1.0
4,839,366	+		Pf1N1B4_4381	0.40	+1.2
4,839,511	-		Pf1N1B4_4381	0.56	-0.8
4,839,725	-		Pf1N1B4_4381	0.80	-1.3
4,839,814	-				-1.3
4,840,007	-				+1.5
4,840,023	+				+0.4
4,840,024	-				+1.5
4,840,024	-				-0.2
4,840,569	+		Pf1N1B4_4382	0.25	+1.5
4,840,569	+		Pf1N1B4_4382	0.25	-0.8
4,840,602	+		Pf1N1B4_4382	0.27	-0.4
4,840,740	+		Pf1N1B4_4382	0.35	-1.8
4,840,741	-		Pf1N1B4_4382	0.35	-2.2
4,840,741	-		Pf1N1B4_4382	0.35	+0.2
4,840,742	+				+1.2
4,840,742	+		Pf1N1B4_4382	0.35	-0.4