Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4350

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
4,805,242	+				-0.8
4,805,390	-		Pf1N1B4_4349	0.35	+0.5
4,805,434	+		Pf1N1B4_4349	0.39	-0.3
4,805,435	-		Pf1N1B4_4349	0.39	+0.2
4,805,435	-		Pf1N1B4_4349	0.39	+0.3
4,805,453	-		Pf1N1B4_4349	0.41	-0.2
4,805,720	-		Pf1N1B4_4349	0.65	+0.5
4,805,720	-		Pf1N1B4_4349	0.65	-1.4
4,805,824	+				-1.4
4,805,825	-		Pf1N1B4_4349	0.74	-0.4
4,805,924	+		Pf1N1B4_4349	0.84	+0.2
4,805,942	-				-0.8
4,805,998	+				+0.2
4,806,066	+				-0.5
4,806,067	-				-0.8
4,806,127	+				-1.4
4,806,128	-				-2.1
4,806,139	+				-0.1
4,806,139	+				-0.8
4,806,633	+		Pf1N1B4_4350	0.50	+0.2
4,806,633	+		Pf1N1B4_4350	0.50	-0.6
4,806,633	+		Pf1N1B4_4350	0.50	-1.8
4,806,633	+		Pf1N1B4_4350	0.50	-0.4
4,806,633	+		Pf1N1B4_4350	0.50	-0.9
4,806,634	-		Pf1N1B4_4350	0.50	-0.2
4,806,634	-		Pf1N1B4_4350	0.50	+0.5
4,806,634	-		Pf1N1B4_4350	0.50	+0.2
4,806,634	-		Pf1N1B4_4350	0.50	-0.7
4,806,634	-		Pf1N1B4_4350	0.50	+0.5
4,806,797	-		Pf1N1B4_4350	0.68	-1.7
4,806,874	-		Pf1N1B4_4350	0.77	-0.4
4,806,940	-		Pf1N1B4_4350	0.84	-2.6
4,806,940	-		Pf1N1B4_4350	0.84	+1.4
4,807,024	-				-1.2
4,807,024	-				-0.8
4,807,028	-				+2.0
4,807,445	+		Pf1N1B4_4351	0.40	+1.6
4,807,446	-		Pf1N1B4_4351	0.41	+0.8
4,807,446	-		Pf1N1B4_4351	0.41	+0.7
4,807,452	-		Pf1N1B4_4351	0.41	-0.3
4,807,452	-		Pf1N1B4_4351	0.41	+0.9
4,807,467	-		Pf1N1B4_4351	0.43	-0.0
4,807,467	-		Pf1N1B4_4351	0.43	-1.6
4,807,467	-		Pf1N1B4_4351	0.43	+0.5
4,807,664	+		Pf1N1B4_4351	0.64	+0.1
4,807,665	-		Pf1N1B4_4351	0.64	-1.4
4,807,665	-				+0.2
4,807,745	+		Pf1N1B4_4351	0.73	-1.8
4,807,745	+		Pf1N1B4_4351	0.73	+1.2
4,807,746	-		Pf1N1B4_4351	0.73	-1.8
4,807,746	-		Pf1N1B4_4351	0.73	-2.4
4,807,746	-		Pf1N1B4_4351	0.73	+3.1
4,807,746	-		Pf1N1B4_4351	0.73	+1.3
4,807,773	-		Pf1N1B4_4351	0.76	+0.0
4,807,820	+		Pf1N1B4_4351	0.81	-0.0
4,807,832	+		Pf1N1B4_4351	0.83	+0.4
4,807,841	-				-0.4
4,808,029	+				+0.9
4,808,030	-				+1.2