Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4106

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
4,552,567	+		Pf1N1B4_4104	0.41	+0.9
4,552,567	+		Pf1N1B4_4104	0.41	-0.3
4,552,568	-		Pf1N1B4_4104	0.42	+0.3
4,552,568	-		Pf1N1B4_4104	0.42	+0.0
4,552,765	-		Pf1N1B4_4104	0.82	-2.3
4,553,212	+		Pf1N1B4_4105	0.67	+1.3
4,553,212	+		Pf1N1B4_4105	0.67	+0.7
4,553,213	-				+0.3
4,553,213	-		Pf1N1B4_4105	0.67	-0.5
4,553,386	-				-1.3
4,553,436	+				-2.3
4,553,440	-				+0.3
4,553,440	-				-0.7
4,553,446	+				+1.2
4,553,525	+		Pf1N1B4_4106	0.11	-0.6
4,553,549	+		Pf1N1B4_4106	0.16	-1.2
4,553,550	-		Pf1N1B4_4106	0.16	+1.0
4,553,550	-				-0.7
4,553,730	+		Pf1N1B4_4106	0.47	-0.3
4,553,731	-				+1.3
4,553,739	-				-2.1
4,553,871	+		Pf1N1B4_4106	0.72	-1.3
4,553,872	-		Pf1N1B4_4106	0.72	-1.3
4,553,872	-		Pf1N1B4_4106	0.72	-2.5
4,553,883	-				-1.0
4,553,890	+		Pf1N1B4_4106	0.75	-1.5
4,554,053	-				+0.1
4,554,053	-				-0.3
4,554,053	-				-0.1
4,554,057	-				+0.7
4,554,057	-				-1.7
4,554,091	-				+0.1
4,554,420	+		Pf1N1B4_4107	0.23	-0.4
4,554,738	+		Pf1N1B4_4107	0.73	-1.1
4,554,738	+		Pf1N1B4_4107	0.73	+0.6
4,554,738	+		Pf1N1B4_4107	0.73	+1.1
4,554,903	+				-1.5
4,554,935	+				-1.3
4,554,935	+				-0.5
4,554,974	+				-0.7
4,554,986	+				+1.3
4,554,986	+				+0.3
4,554,986	+				-0.7