Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4094
Experiment: Gentamicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Gentamicin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,542,240 | + | +0.3 | |||
4,542,240 | + | +0.1 | |||
4,542,243 | - | -2.0 | |||
4,542,307 | + | +1.1 | |||
4,542,320 | + | -0.1 | |||
4,542,320 | + | -0.3 | |||
4,542,484 | + | Pf1N1B4_4093 | 0.23 | +0.1 | |
4,542,656 | - | Pf1N1B4_4093 | 0.49 | +0.9 | |
4,542,712 | - | Pf1N1B4_4093 | 0.58 | +1.5 | |
4,542,770 | - | Pf1N1B4_4093 | 0.67 | -0.3 | |
4,542,770 | - | Pf1N1B4_4093 | 0.67 | -1.1 | |
4,542,929 | - | +0.3 | |||
4,542,958 | + | +1.3 | |||
4,542,959 | - | +0.3 | |||
4,543,021 | + | -0.7 | |||
4,543,167 | + | +0.6 | |||
4,543,167 | + | +0.3 | |||
4,543,176 | - | +0.6 | |||
4,543,176 | - | -1.7 | |||
4,543,380 | - | Pf1N1B4_4094 | 0.34 | +1.3 | |
4,543,445 | - | Pf1N1B4_4094 | 0.47 | -0.5 | |
4,543,536 | - | Pf1N1B4_4094 | 0.65 | +0.7 | |
4,543,928 | - | Pf1N1B4_4095 | 0.21 | -0.7 | |
4,544,388 | + | Pf1N1B4_4095 | 0.67 | +0.1 | |
4,544,639 | + | -0.5 |
Or see this region's nucleotide sequence