Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4092

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
4,539,808	-				+0.9
4,539,808	-				+1.1
4,539,824	+				+0.1
4,539,825	-				+0.3
4,539,825	-				-1.0
4,539,825	-				+0.6
4,539,832	+				-1.3
4,539,832	+				-0.9
4,539,862	+				+0.9
4,539,862	+				+1.4
4,539,862	+				-2.5
4,539,863	-				+0.3
4,539,863	-				-1.5
4,540,024	-		Pf1N1B4_4091	0.27	-0.7
4,540,024	-		Pf1N1B4_4091	0.27	+2.3
4,540,024	-		Pf1N1B4_4091	0.27	-0.0
4,540,024	-		Pf1N1B4_4091	0.27	+0.1
4,540,102	-		Pf1N1B4_4091	0.37	+0.5
4,540,102	-		Pf1N1B4_4091	0.37	+0.6
4,540,144	-		Pf1N1B4_4091	0.43	+1.0
4,540,152	+		Pf1N1B4_4091	0.44	+0.9
4,540,153	-		Pf1N1B4_4091	0.44	-0.3
4,540,285	-		Pf1N1B4_4091	0.62	-0.7
4,540,291	-				-0.1
4,540,291	-		Pf1N1B4_4091	0.63	+0.6
4,540,291	-		Pf1N1B4_4091	0.63	-2.5
4,540,291	-		Pf1N1B4_4091	0.63	-1.0
4,540,299	+		Pf1N1B4_4091	0.64	+1.7
4,540,404	+				-0.7
4,540,405	-		Pf1N1B4_4091	0.78	+0.3
4,540,405	-		Pf1N1B4_4091	0.78	-0.7
4,540,405	-		Pf1N1B4_4091	0.78	-0.0
4,540,464	+		Pf1N1B4_4091	0.86	+1.2
4,540,464	+		Pf1N1B4_4091	0.86	-0.3
4,540,563	+				+0.7
4,540,563	+				+0.3
4,540,563	+				-0.1
4,540,564	-				+0.0
4,540,590	+				+0.3
4,540,591	-				-0.8
4,540,760	+				+1.3
4,540,822	+				+0.4
4,540,822	+				-1.0
4,540,823	-				+0.6
4,541,071	+				-0.7
4,541,297	-		Pf1N1B4_4092	0.38	+0.5
4,541,423	-		Pf1N1B4_4092	0.47	-1.1
4,541,423	-		Pf1N1B4_4092	0.47	-1.3
4,541,423	-		Pf1N1B4_4092	0.47	-0.3
4,541,423	-				+1.6
4,541,423	-		Pf1N1B4_4092	0.47	+1.9
4,541,444	-		Pf1N1B4_4092	0.48	-0.1
4,541,630	-		Pf1N1B4_4092	0.61	-0.8
4,541,630	-				+0.3
4,541,833	+				-0.7
4,541,834	-		Pf1N1B4_4092	0.76	+0.8
4,541,894	-		Pf1N1B4_4092	0.80	-0.9
4,541,896	+		Pf1N1B4_4092	0.80	+1.9
4,541,896	+		Pf1N1B4_4092	0.80	+0.3
4,541,896	+		Pf1N1B4_4092	0.80	+1.9
4,541,897	-		Pf1N1B4_4092	0.80	+1.3
4,541,897	-		Pf1N1B4_4092	0.80	+0.1
4,541,969	+		Pf1N1B4_4092	0.85	-2.0
4,541,969	+		Pf1N1B4_4092	0.85	-0.8
4,541,986	+		Pf1N1B4_4092	0.87	-1.1
4,541,986	+		Pf1N1B4_4092	0.87	-0.7
4,542,072	+				-2.7
4,542,112	+				-2.0
4,542,115	+				+0.5
4,542,240	+				+0.3
4,542,240	+				+0.1
4,542,243	-				-2.0
4,542,307	+				+1.1
4,542,320	+				-0.1
4,542,320	+				-0.3
4,542,484	+		Pf1N1B4_4093	0.23	+0.1
4,542,656	-		Pf1N1B4_4093	0.49	+0.9
4,542,712	-		Pf1N1B4_4093	0.58	+1.5
4,542,770	-		Pf1N1B4_4093	0.67	-0.3
4,542,770	-		Pf1N1B4_4093	0.67	-1.1
4,542,929	-				+0.3
4,542,958	+				+1.3
4,542,959	-				+0.3
4,543,021	+				-0.7
4,543,167	+				+0.6
4,543,167	+				+0.3